BLASTX nr result

ID: Cephaelis21_contig00052098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00052098
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307313.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002316753.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002307299.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002307313.1| predicted protein [Populus trichocarpa] gi|222856762|gb|EEE94309.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +3

Query: 27  LKGWWDEHLSIEVKDRILNSIKTCQDGEPNL-TNGQTIPDAISTLLYTIAKTFTGDP 194
           LKGWWD HL       ILNSI+T +D  P L  +G TI DA+STL+ TI+  F GDP
Sbjct: 43  LKGWWDYHLIETDHLHILNSIQTYEDQTPILDPSGNTIQDAVSTLILTISLHFVGDP 99


>ref|XP_002316753.1| predicted protein [Populus trichocarpa] gi|222859818|gb|EEE97365.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 30  KGWWDEHLSIEVKDRILNSIKTCQDGEPNL-TNGQTIPDAISTLLYTIAKTFTGDPCIF* 206
           KGWWD HL+      ILNS++T +D  P L  +G TI D +STL+ TI+  F GDP    
Sbjct: 30  KGWWDYHLTETDHLHILNSVQTYEDQTPILDPSGNTIQDVVSTLILTISLYFVGDPSHLK 89

Query: 207 DRFSE 221
           D+ +E
Sbjct: 90  DKNAE 94


>ref|XP_002307299.1| predicted protein [Populus trichocarpa] gi|222856748|gb|EEE94295.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +3

Query: 27  LKGWWDEHLSIEVKDRILNSIKTCQDGEPNL-TNGQTIPDAISTLLYTIAKTFTGDPCIF 203
           LKGWWD HL+      ILNSI+T +D    L  +G TI D +STL+ TI+  F GDP   
Sbjct: 29  LKGWWDYHLTEIDHLHILNSIQTYEDQTSILDPSGNTIQDDVSTLILTISLHFVGDPSHL 88

Query: 204 *DRFSE 221
            DR +E
Sbjct: 89  KDRNAE 94


Top