BLASTX nr result

ID: Cephaelis21_contig00051936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051936
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   109   2e-22
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   106   2e-21
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   106   2e-21

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  127 bits (319), Expect = 1e-27
 Identities = 58/83 (69%), Positives = 70/83 (84%)
 Frame = +2

Query: 5   VHDSSDAIKRVCKIMMSCPKVGLDTVFEQKGVRVSPEEVEEVLKRFANAGMLAFRFFEWA 184
           + +++D  KR+CKIM+SCPK+ LDT   + G+RVSP  VE VLKRF NAGMLA++FFEWA
Sbjct: 8   IKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWA 67

Query: 185 GKQRNYEHSVRAYHTMIESLAKI 253
           GKQRNY HS+RAYHTMIESLAKI
Sbjct: 68  GKQRNYTHSIRAYHTMIESLAKI 90


>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/83 (69%), Positives = 66/83 (79%)
 Frame = +2

Query: 5   VHDSSDAIKRVCKIMMSCPKVGLDTVFEQKGVRVSPEEVEEVLKRFANAGMLAFRFFEWA 184
           + D  +A +RVCK+MM+CP +GLDT   Q GVRVSP+ VE VLKRF NAGM AFRFFEWA
Sbjct: 9   IQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWA 68

Query: 185 GKQRNYEHSVRAYHTMIESLAKI 253
            KQR Y HS+RAYH MIESLAKI
Sbjct: 69  EKQRGYSHSIRAYHLMIESLAKI 91


>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334980|gb|EFH65398.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/83 (60%), Positives = 66/83 (79%)
 Frame = +2

Query: 5   VHDSSDAIKRVCKIMMSCPKVGLDTVFEQKGVRVSPEEVEEVLKRFANAGMLAFRFFEWA 184
           V D +D  K + K++MS P++ +D+  +Q G+RVSPE VE+VL RF NAG+LA+RFF+W+
Sbjct: 30  VRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWS 89

Query: 185 GKQRNYEHSVRAYHTMIESLAKI 253
            KQR+YEHSVRAYH MIES AKI
Sbjct: 90  EKQRHYEHSVRAYHMMIESTAKI 112


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/83 (59%), Positives = 64/83 (77%)
 Frame = +2

Query: 5   VHDSSDAIKRVCKIMMSCPKVGLDTVFEQKGVRVSPEEVEEVLKRFANAGMLAFRFFEWA 184
           V D +D  K + K++MS P++ LD+  +Q G+RVS E VE+VL RF NAG+L +RFF+W+
Sbjct: 29  VRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWS 88

Query: 185 GKQRNYEHSVRAYHTMIESLAKI 253
            KQR+YEHSVRAYH MIES AKI
Sbjct: 89  EKQRHYEHSVRAYHMMIESTAKI 111


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
           gi|332197848|gb|AEE35969.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/83 (59%), Positives = 64/83 (77%)
 Frame = +2

Query: 5   VHDSSDAIKRVCKIMMSCPKVGLDTVFEQKGVRVSPEEVEEVLKRFANAGMLAFRFFEWA 184
           V D +D  K + K++MS P++ LD+  +Q G+RVS E VE+VL RF NAG+L +RFF+W+
Sbjct: 65  VRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWS 124

Query: 185 GKQRNYEHSVRAYHTMIESLAKI 253
            KQR+YEHSVRAYH MIES AKI
Sbjct: 125 EKQRHYEHSVRAYHMMIESTAKI 147


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