BLASTX nr result

ID: Cephaelis21_contig00051916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051916
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    92   3e-17
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    92   6e-17
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    92   6e-17
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    91   7e-17
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    89   5e-16

>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = +3

Query: 3   LITLIPKKDHP*SFSDYRPISLCNFCNKILSKLLAKRLERVLPNIISPQQSGFVKGRLIS 182
           +I LIPK   P +  D RPISLCN   KI+SK+LA RL+ +LP +ISP QS FV GRLIS
Sbjct: 182 IIVLIPKVPKPENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVISPTQSAFVPGRLIS 241

Query: 183 DNILMAQELMNHLNSKVRG 239
           DNIL+A E+ +++ SK RG
Sbjct: 242 DNILVAYEMTHYMRSKKRG 260


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = +3

Query: 6   ITLIPKKDHP*SFSDYRPISLCNFCNKILSKLLAKRLERVLPNIISPQQSGFVKGRLISD 185
           I LIPK   P    D RPISLCN C K++SK+LA RL+++LP++ISP QS FV GRLISD
Sbjct: 745 IVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISD 804

Query: 186 NILMAQELMNHLNSKVRG 239
           NIL+A E+ +++ +K  G
Sbjct: 805 NILIADEMTHYMRNKRSG 822


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = +3

Query: 6   ITLIPKKDHP*SFSDYRPISLCNFCNKILSKLLAKRLERVLPNIISPQQSGFVKGRLISD 185
           I LIPK   P    D RPISLCN C K++SK+LA RL+++LP++ISP QS FV GRLISD
Sbjct: 718 IVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISD 777

Query: 186 NILMAQELMNHLNSKVRG 239
           NIL+A E+ +++ +K  G
Sbjct: 778 NILIADEMTHYMRNKRSG 795


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/79 (55%), Positives = 59/79 (74%)
 Frame = +3

Query: 3   LITLIPKKDHP*SFSDYRPISLCNFCNKILSKLLAKRLERVLPNIISPQQSGFVKGRLIS 182
           +I LIPK + P    D RPISLCN   K++SK+LA RL+++LPNIIS  QS FV GRLI+
Sbjct: 69  IIVLIPKTNTPQMLKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLIT 128

Query: 183 DNILMAQELMNHLNSKVRG 239
           DN+L+A E+++HL S  +G
Sbjct: 129 DNVLLAYEIVHHLKSIKKG 147


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = +3

Query: 6   ITLIPKKDHP*SFSDYRPISLCNFCNKILSKLLAKRLERVLPNIISPQQSGFVKGRLISD 185
           I LIPK DHP +  D RPISLCN   KIL+K LA RL+RVL   IS +QSGFV GR I+D
Sbjct: 81  IVLIPKCDHPRTMRDLRPISLCNVVYKILAKTLANRLQRVLDKCISVEQSGFVAGRTITD 140

Query: 186 NILMAQELMNHLNSKVRG 239
           NIL+A E++++L  K  G
Sbjct: 141 NILIALEIIHYLKCKTWG 158


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