BLASTX nr result

ID: Cephaelis21_contig00051871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051871
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   2e-17
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    79   3e-13
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    77   1e-12
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    69   3e-10

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = +2

Query: 20  PDLVVLMETRISGIKADKVIHKMGYDGSHRVEAKGFARGIWILWK-DSITVEILLNLAQF 196
           P ++ L+ET ISG +A ++  ++G+ G  RVEA+GF  GIW+ WK + +TV    + +Q 
Sbjct: 29  PTVLALVETHISGDQAQRICDRIGFSGQTRVEAEGFRGGIWLFWKSEEVTVTPYGSHSQ- 87

Query: 197 IHIKISLRR-DKCEFLFTAIYGSPQKHKRSELWRCLRLIAEAENGPWLLAGDF 352
            H+ + +RR     +LF+AIY SP    R ELWR L  I     GPWLLAGDF
Sbjct: 88  -HLTVEIRRIGDDPWLFSAIYASPDSTLRKELWRELEQIKNQYTGPWLLAGDF 139


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
 Frame = +2

Query: 14  YKPDLVVLMETRISGIKADKVIHKMGYDGSHRVEAKGFARGIWILWKDSI-TVEILLNLA 190
           +  D++ L ET   G +A ++  ++G++   RV+A G + G+W+LW+ S+  VEI+ + +
Sbjct: 534 FDTDVLALFETHAGGDRAGRICQRLGFENQFRVDAVGQSSGLWLLWRSSVGNVEIVSSTS 593

Query: 191 QFIHIKISLRRDKCEFLFTAIYGSPQKHKRSELWRCLRLIAEAENGPWLLAGDF 352
           QFIH KI    +    +   +Y +P   +RS LW  LR      +GP ++ GDF
Sbjct: 594 QFIHAKILTGLESVHLV--VVYAAPSVSRRSGLWNELREAVSGLDGPLIIGGDF 645


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/114 (35%), Positives = 67/114 (58%)
 Frame = +2

Query: 11  LYKPDLVVLMETRISGIKADKVIHKMGYDGSHRVEAKGFARGIWILWKDSITVEILLNLA 190
           LY P+++ L ET+      + V+  +G+   H VE  G + G+ ++WKDS+ +++L +  
Sbjct: 26  LYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPIGKSGGLALMWKDSVQIKVLQSDK 85

Query: 191 QFIHIKISLRRDKCEFLFTAIYGSPQKHKRSELWRCLRLIAEAENGPWLLAGDF 352
           + I   + + +DK EF  T IYG P + +R ELW  L  +  + +GPW+L GDF
Sbjct: 86  RLIDALL-IWQDK-EFYLTCIYGEPVQAERGELWERLTRLGLSRSGPWMLTGDF 137


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
 Frame = +2

Query: 11  LYKPDLVVLMETRISGIKADKVIHKMGYDGSHRVEAKGFARGIWILWKDSITVEILLNLA 190
           ++KPDL++L+ET+ S ++AD+   ++GY     + A G   GIW++WK  I    L++ A
Sbjct: 26  MHKPDLLILLETKCSSLRADQATKRLGYVNFRIIPAFGKRGGIWLMWKADIA---LVHYA 82

Query: 191 QF----IHIKISLRRDKCEFLFTAIYGSPQKHKRSELWRCLRLIAEAENGPWLLAGD 349
            +     H    LR D  E L T ++      +R++ W  L   +     PWL+AGD
Sbjct: 83  DYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGD 139


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/112 (29%), Positives = 62/112 (55%)
 Frame = +2

Query: 17  KPDLVVLMETRISGIKADKVIHKMGYDGSHRVEAKGFARGIWILWKDSITVEILLNLAQF 196
           KP+++ L+ET  +  +  ++ +K+ Y+GS+ V  +G + G+ ++W+    V IL +  ++
Sbjct: 369 KPEVIFLIETFCTSARISEIANKLNYEGSYGVNCRGHSAGLGLIWRCKDKVTILGSHDRY 428

Query: 197 IHIKISLRRDKCEFLFTAIYGSPQKHKRSELWRCLRLIAEAENGPWLLAGDF 352
           I   ++L   +  F  T  YG   + +RS  W  LR +  A + PW + GDF
Sbjct: 429 IDAIVTLENQRM-FRLTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDF 479


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