BLASTX nr result

ID: Cephaelis21_contig00051838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051838
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   176   2e-42

>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  187 bits (475), Expect = 8e-46
 Identities = 85/129 (65%), Positives = 109/129 (84%)
 Frame = +2

Query: 2   LYHYSCMVDMLGRAGLLDEAYELICSMVVKPDAAIWRTLLGACRNHKNASLGGKIVEHLI 181
           ++HY CMVD+LGRAGLLD+AY+LI SMV+KPD+ +WRTLLGACR H++A+LG +++ HLI
Sbjct: 408 IHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLI 467

Query: 182 ELKAEGAGDYVLLLNIYSSRNDSEKVKEVRKLMREKGIHTNPASSTIEFKGRIHEFVADD 361
           ELKA+ AGDYVLLLNIYSS  + +KV ++RK M+EKGI T+P  STIE KG++HEFV DD
Sbjct: 468 ELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDD 527

Query: 362 VSHPRKKEI 388
           + HPR  EI
Sbjct: 528 ILHPRTDEI 536


>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  186 bits (471), Expect = 2e-45
 Identities = 88/129 (68%), Positives = 107/129 (82%)
 Frame = +2

Query: 2   LYHYSCMVDMLGRAGLLDEAYELICSMVVKPDAAIWRTLLGACRNHKNASLGGKIVEHLI 181
           ++HY CMVD+LGRAG L +AY+LI SM VKPD+ IWRTLLGACR H+N  LG  +VEHLI
Sbjct: 264 IHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGACRIHRNVILGEHVVEHLI 323

Query: 182 ELKAEGAGDYVLLLNIYSSRNDSEKVKEVRKLMREKGIHTNPASSTIEFKGRIHEFVADD 361
           ELKA+ AGDYVLL N+YSS ++ +KV E+RK M+EKGI T PASS+IE KG++HEFV DD
Sbjct: 324 ELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGIQTTPASSSIELKGKVHEFVVDD 383

Query: 362 VSHPRKKEI 388
           VSHP+K EI
Sbjct: 384 VSHPQKDEI 392


>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  184 bits (466), Expect = 8e-45
 Identities = 88/129 (68%), Positives = 104/129 (80%)
 Frame = +2

Query: 2   LYHYSCMVDMLGRAGLLDEAYELICSMVVKPDAAIWRTLLGACRNHKNASLGGKIVEHLI 181
           ++HY CMVD+LGRAGLLD+AY+LI SMVVKPD+ +WRTLLGACR H + +LG +++ HLI
Sbjct: 344 VHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLI 403

Query: 182 ELKAEGAGDYVLLLNIYSSRNDSEKVKEVRKLMREKGIHTNPASSTIEFKGRIHEFVADD 361
           ELKA+ AGDYVLLLNIYSS    EKV EVRKLM+ K I T P  STIE KG +HEFV DD
Sbjct: 404 ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDD 463

Query: 362 VSHPRKKEI 388
           VSH R +EI
Sbjct: 464 VSHSRNREI 472


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/129 (64%), Positives = 106/129 (82%)
 Frame = +2

Query: 2   LYHYSCMVDMLGRAGLLDEAYELICSMVVKPDAAIWRTLLGACRNHKNASLGGKIVEHLI 181
           ++HY C+VD+LGRAG+LD+AYELI SM V+PDA +WRTLLGACR H + +LG +IVEHLI
Sbjct: 367 VHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLI 426

Query: 182 ELKAEGAGDYVLLLNIYSSRNDSEKVKEVRKLMREKGIHTNPASSTIEFKGRIHEFVADD 361
           ELK++ AGDYVLLLNIYSS  + +KV E+RKLM+EKGI+T P  +TIE  G +H+F  DD
Sbjct: 427 ELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDD 486

Query: 362 VSHPRKKEI 388
           +SHP K +I
Sbjct: 487 ISHPMKDKI 495


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/129 (65%), Positives = 101/129 (78%)
 Frame = +2

Query: 2   LYHYSCMVDMLGRAGLLDEAYELICSMVVKPDAAIWRTLLGACRNHKNASLGGKIVEHLI 181
           L+HY C+VD+LGRA LLD+AY LI SM +KPD+ IWRTLLGACR H +  LG +++ HLI
Sbjct: 355 LHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLI 414

Query: 182 ELKAEGAGDYVLLLNIYSSRNDSEKVKEVRKLMREKGIHTNPASSTIEFKGRIHEFVADD 361
           ELKAE AGDYVLLLN YS+    EKV E+R LM+EK IHT P  S IE +G +HEF+ DD
Sbjct: 415 ELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDD 474

Query: 362 VSHPRKKEI 388
           VSHPRK+EI
Sbjct: 475 VSHPRKEEI 483


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