BLASTX nr result

ID: Cephaelis21_contig00051680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051680
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]         115   5e-24
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   111   7e-23
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...   110   1e-22
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...   107   1e-21
gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indi...   107   1e-21

>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 1/159 (0%)
 Frame = -3

Query: 475  LDQEKELWKQKSCCEWLALGDRNTKFFHSKIKARRRSNHISNLLIED-TWIDDQERLQSE 299
            L QE+ LW QKS  +W+  GDRNT+FFH +  ARR+ N I  L ++D  W  D E L  E
Sbjct: 732  LVQEELLWFQKSIEQWVRFGDRNTRFFHIQTLARRKHNKIHGLFLKDGVWETDPEVLSQE 791

Query: 298  ALEYFKKLYTETAFMNTTGMRRGDFPQLNARSLENLGRGVSTDEIKKALFEMNPLKAPGI 119
            A  ++K L+     ++   +     P LN ++  NL   V+ +E+K A+F MN  KAPG 
Sbjct: 792  AESFYKSLFCHLDDVDLGCLGDVPLPSLNEKACNNLTAPVTMEEVKAAVFHMNSFKAPGP 851

Query: 118  DGLHAKFYQSQWDVIGASLCNMIQNIFQGGRIEAELNST 2
            DG  A F++  W++IG  +  M++  F G  ++  +  T
Sbjct: 852  DGFQAFFFKEYWEIIGLDVWKMVKQAFSGVPLDPRMLET 890


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  111 bits (277), Expect = 7e-23
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 3/160 (1%)
 Frame = -3

Query: 478 ILDQEKELWKQKSCCEWLALGDRNTKFFHSKIKARRRSNHISNLL-IEDTWIDDQERLQS 302
           +L QE+ LW QKS  + LALGDRNT FFH+    RRR N I  L   ED W+ ++E L+ 
Sbjct: 143 LLHQEETLWFQKSREKLLALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEK 202

Query: 301 EALEYFKKLYT--ETAFMNTTGMRRGDFPQLNARSLENLGRGVSTDEIKKALFEMNPLKA 128
            A++Y++KLY+  + + +  T    G FP+L      NL R  + DE+  A+  M   KA
Sbjct: 203 LAMDYYRKLYSLEDVSVVRGTLPTEG-FPRLTREEKNNLNRPFTRDEVVVAVRSMGRFKA 261

Query: 127 PGIDGLHAKFYQSQWDVIGASLCNMIQNIFQGGRIEAELN 8
           PG DG    FYQ  W+ +G S+   +   F+ G +    N
Sbjct: 262 PGPDGYQPVFYQQCWETVGESVSKFVMEFFESGVLPKSTN 301


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
 Frame = -3

Query: 478 ILDQEKELWKQKSCCEWLALGDRNTKFFHSKIKARRRSNHISNLL-IEDTWIDDQERLQS 302
           +L+QE+ +W QKS  +W+ALGDRNTK+FH+    RRR N I  L   E  W+++ E L  
Sbjct: 301 VLEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEPEELAK 360

Query: 301 EALEYFKKLYT-ETAFMNTTGMRRGDFPQLNARSLENLGRGVSTDEIKKALFEMNPLKAP 125
            A+EY++KLY+ E        +    F  L    + +L +   + +++ ++  M   KAP
Sbjct: 361 MAVEYYQKLYSVEDVDSIVERLPSAGFTCLTREEISDLSKPFMSIDVENSMRGMGRFKAP 420

Query: 124 GIDGLHAKFYQSQWDVIGASLCNMIQNIFQGGRIEAELN 8
           G DG    FYQ  W+V+G S+ N + N F+ G++  E N
Sbjct: 421 GPDGYQPVFYQDCWEVVGQSVTNFVLNFFETGQLPNEAN 459


>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 QILDQEKELWKQKSCCEWLALGDRNTKFFHSKIKARRRSNHISNLLIEDTWIDDQER-LQ 305
           ++L +E+ +W Q+S   WL  GDRNT+FFHSK   R + N I+ L   D  + +  + L+
Sbjct: 406 ELLYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLRDSDGTVHNTTKELE 465

Query: 304 SEALEYFKKLYTETAFMNTTGMRRGDFPQLNARSLENLGRGVSTDEIKKALFEMNPLKAP 125
           S A EYF++L+T    ++ + +     P++     E L + VS +EI  ALF++ PLKAP
Sbjct: 466 SMATEYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAP 525

Query: 124 GIDGLHAKFYQSQWDVIGASLCNMIQNIFQGGRIEAELNST 2
           G DG   +FYQ  W ++   +   +Q  F  G + + +N T
Sbjct: 526 GPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNET 566


>gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indica Group]
          Length = 320

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 2/160 (1%)
 Frame = -3

Query: 475 LDQEKEL-WKQKSCCEWLALGDRNTKFFHSKIKARRRSNHISNLLIED-TWIDDQERLQS 302
           L+Q+ ++ WKQ++   WL  GDRNT FFH+    RRR N I+ L  ED +W++ +E  ++
Sbjct: 130 LEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRA 189

Query: 301 EALEYFKKLYTETAFMNTTGMRRGDFPQLNARSLENLGRGVSTDEIKKALFEMNPLKAPG 122
             +E+FK+L+T     N+  +      +++    E+L    + +E+K+AL  +  LKAPG
Sbjct: 190 MIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPG 249

Query: 121 IDGLHAKFYQSQWDVIGASLCNMIQNIFQGGRIEAELNST 2
            DG+ A FY++ WDV+G  + + +  + +GG I    N T
Sbjct: 250 PDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDT 289


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