BLASTX nr result

ID: Cephaelis21_contig00051588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051588
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   110   9e-23
ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...   103   1e-20
ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containi...   101   5e-20
dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]                           95   5e-18

>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
 Frame = +3

Query: 102 TLRQNCKAIEQVSQVHAQAIXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXNPIHPIH-- 275
           T+ + CK+++Q+ QVHA  I                               +P  P    
Sbjct: 20  TVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALT 79

Query: 276 -YVATLFNLIPNPSTFCYNTIIRAHTLLSSPQTAFIFFSRMAQLSIPPDSHTFPFAIKAC 452
            Y  ++FN IPNPSTF YNT+IRAHTLLSSP  A + F RM +LS+PPD+HTFPF +KAC
Sbjct: 80  GYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKAC 139

Query: 453 AQINSLSLAKALHCQA 500
           + + +LSLA+ LH QA
Sbjct: 140 SLLPALSLAQTLHSQA 155


>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  107 bits (266), Expect = 1e-21
 Identities = 58/147 (39%), Positives = 81/147 (55%)
 Frame = +3

Query: 57  ANDNSMQTILTYLIRTLRQNCKAIEQVSQVHAQAIXXXXXXXXXXXXXXXQIXXXXXXXX 236
           +N  + Q   + +I+ ++Q CK I Q+ Q+HA  I                +        
Sbjct: 7   SNHITPQNYHSIIIKLIKQ-CKTISQLHQLHAYTITNTPLSFHSSPSL---LTKFLYTLT 62

Query: 237 XXXXXXNPIHPIHYVATLFNLIPNPSTFCYNTIIRAHTLLSSPQTAFIFFSRMAQLSIPP 416
                 +    +HY  ++FN I NPSTFCYNTIIR HTLLS P  A  FF++M +LS+P 
Sbjct: 63  TKAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPL 122

Query: 417 DSHTFPFAIKACAQINSLSLAKALHCQ 497
           DSH+FPF +KACAQ+  +  A+ LHCQ
Sbjct: 123 DSHSFPFTLKACAQLGGVFSARCLHCQ 149


>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/138 (41%), Positives = 75/138 (54%)
 Frame = +3

Query: 84  LTYLIRTLRQNCKAIEQVSQVHAQAIXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXNPI 263
           L++ I TL + CK I Q+ QVHAQA                 +              +  
Sbjct: 26  LSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQI-LTKILYALTTIPTPKSSF 84

Query: 264 HPIHYVATLFNLIPNPSTFCYNTIIRAHTLLSSPQTAFIFFSRMAQLSIPPDSHTFPFAI 443
             +HY  + F+ I NPSTFCYN IIR HTL SS  +A  FF +M + S+PPD H++PFA+
Sbjct: 85  SLLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFAL 144

Query: 444 KACAQINSLSLAKALHCQ 497
           KACA +  LSLA+ LH Q
Sbjct: 145 KACAHLRVLSLAQCLHSQ 162


>ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Glycine max]
          Length = 577

 Score =  101 bits (252), Expect = 5e-20
 Identities = 59/137 (43%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
 Frame = +3

Query: 96  IRTLR--QNCKAIEQVSQVHAQAIXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXNPIHP 269
           +RTL+  + CK+I Q+ QVHA +I                +              + I  
Sbjct: 1   MRTLQVIKQCKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSII-- 58

Query: 270 IHYVATLFNLIPNPSTFCYNTIIRAHTLLSSPQTAFIFFSRMAQLSIPPDSHTFPFAIKA 449
             Y  +LF+ IPNPSTF +NT+IR HTLL SP  A   FS + +LS+PPD HTFPF +KA
Sbjct: 59  TFYALSLFHSIPNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKA 118

Query: 450 CAQINSLSLAKALHCQA 500
            AQ++SLSLA++LH QA
Sbjct: 119 SAQLHSLSLAQSLHSQA 135


>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
          Length = 248

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/135 (38%), Positives = 69/135 (51%)
 Frame = +3

Query: 96  IRTLRQNCKAIEQVSQVHAQAIXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXNPIHPIH 275
           I  L + CK I  + Q+HA AI                +              +    + 
Sbjct: 14  INNLIKQCKTIHHLHQLHANAITNGFLSLNSSSQKI--LTKILYSLNATATSKSSTSLLQ 71

Query: 276 YVATLFNLIPNPSTFCYNTIIRAHTLLSSPQTAFIFFSRMAQLSIPPDSHTFPFAIKACA 455
           Y  ++F+ I NPS FCYN +IRAHTL SSP +A  FF +M + SIPPD H+FPF  KAC+
Sbjct: 72  YAVSVFSAITNPSPFCYNLVIRAHTLHSSPLSALRFFLQMRRFSIPPDFHSFPFVFKACS 131

Query: 456 QINSLSLAKALHCQA 500
           Q+    LA +LH QA
Sbjct: 132 QLRVFFLANSLHSQA 146


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