BLASTX nr result

ID: Cephaelis21_contig00051395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051395
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         112   4e-23
ref|XP_002305092.1| glutamate-gated kainate-type ion channel rec...   102   3e-20
ref|XP_002310140.1| glutamate-gated kainate-type ion channel rec...   102   4e-20
ref|XP_004146036.1| PREDICTED: glutamate receptor 2.5-like [Cucu...   100   2e-19
ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...    99   4e-19

>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/132 (47%), Positives = 85/132 (64%)
 Frame = -3

Query: 414 TFLEFKHKFQRNLRLELPDEHNLEPGIYALQAYDGITAVSKALMELGSQENRNISVSLLR 235
           +F  FK +FQ+  R E P E + EPGI+AL+AYD ITA + A+  LG++ + N SV +  
Sbjct: 292 SFRHFKGQFQKIFRSEYPTEDHSEPGIHALKAYDSITAFANAVNNLGAKSS-NDSVLMKN 350

Query: 234 IIRSNNFTGLTGDVHFRGEALSSEGIFRIVNVVGKRYKELGFWSSSLGFADSLKFDNGKA 55
            I S+NFTGLTG++ F    LS    FRIVN+ G RY  LGFWSS  GF+  L+ +NG+ 
Sbjct: 351 RILSSNFTGLTGNISFVNGVLSHPPTFRIVNIDGNRYNGLGFWSSMFGFSKVLEAENGE- 409

Query: 54  NLSAVNGVQTME 19
            L  VNG + M+
Sbjct: 410 -LIGVNGSRVMK 420


>ref|XP_002305092.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848056|gb|EEE85603.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 942

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/138 (42%), Positives = 80/138 (57%)
 Frame = -3

Query: 414 TFLEFKHKFQRNLRLELPDEHNLEPGIYALQAYDGITAVSKALMELGSQENRNISVSLLR 235
           ++  F+ +F++  R E  DE N  PGI AL+AYD I  V++A+ +LGS  +      LL 
Sbjct: 321 SYQRFEAQFRKIFRAEYLDEDNFLPGIQALRAYDSIGMVTQAIEKLGSDSSS--PKMLLN 378

Query: 234 IIRSNNFTGLTGDVHFRGEALSSEGIFRIVNVVGKRYKELGFWSSSLGFADSLKFDNGKA 55
            +  ++FTGLTG++HF+   LS   I RIVNVVGK+YKEL FW  + GF+ +L    GK 
Sbjct: 379 SVLGSDFTGLTGEIHFKDAMLSQAPILRIVNVVGKKYKELDFWLPNFGFSKTLHPQEGKE 438

Query: 54  NLSAVNGVQTMEKLTGLV 1
             S  N       L G V
Sbjct: 439 RCSNSNVCNNTGCLAGPV 456


>ref|XP_002310140.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222853043|gb|EEE90590.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 760

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/120 (45%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
 Frame = -3

Query: 414 TFLEFKHKFQRNLRLELPDEHNLEPGIYALQAYDGITAVSKALMELGSQENRNISVSLLR 235
           +F +F+ KF+R  R E P++ N +P I+AL+AYD I  V+K+   L     +N S +LL+
Sbjct: 299 SFKDFEVKFERKFRAEYPEDRNSQPSIFALRAYDAIWTVAKSSKML---HEKNYSKTLLQ 355

Query: 234 IIRSNNFTGLTGDVHFRGEALSSEGIFRIVNVVGKRYKELGFWSSSLGFADSL-KFDNGK 58
            I S++F GL+G +HF    L+    F+IVN+VGK Y+ELGFWS   GF D+L K ++GK
Sbjct: 356 HILSSDFEGLSGRIHFTNYKLTYGPNFQIVNIVGKSYRELGFWSPEFGFTDNLVKNNSGK 415


>ref|XP_004146036.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
           gi|449528706|ref|XP_004171344.1| PREDICTED: glutamate
           receptor 2.5-like [Cucumis sativus]
          Length = 859

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/130 (40%), Positives = 77/130 (59%)
 Frame = -3

Query: 411 FLEFKHKFQRNLRLELPDEHNLEPGIYALQAYDGITAVSKALMELGSQENRNISVSLLRI 232
           F EF H+F R  RLE  DE N EPGI+A+QAYD     + A+ +L  + N      L+  
Sbjct: 283 FHEFYHRFSRRFRLEHSDEDNHEPGIFAIQAYDAARTAAMAMSKLQEKGNH-----LMEK 337

Query: 231 IRSNNFTGLTGDVHFRGEALSSEGIFRIVNVVGKRYKELGFWSSSLGFADSLKFDNGKAN 52
           I   +F GL G + FR   L+S   F+I+NV+G+ Y+ELGFWS  LGF+  L+ +N  ++
Sbjct: 338 IELTDFQGLGGKIQFRDRQLASSDTFQIINVMGRSYRELGFWSDKLGFSRELR-ENSSSS 396

Query: 51  LSAVNGVQTM 22
            S  + V+ +
Sbjct: 397 SSMKDLVEVL 406


>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 843

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/115 (45%), Positives = 68/115 (59%)
 Frame = -3

Query: 411 FLEFKHKFQRNLRLELPDEHNLEPGIYALQAYDGITAVSKALMELGSQENRNISVSLLRI 232
           +  F  +F+RN     P+E N +PG YAL+AYD IT + KA+  + S  N + S   L  
Sbjct: 247 YKSFYSQFRRNFSSTYPEEDNFDPGFYALRAYDSITTIIKAMERMSS--NISNSKVFLND 304

Query: 231 IRSNNFTGLTGDVHFRGEALSSEGIFRIVNVVGKRYKELGFWSSSLGFADSLKFD 67
           I S+NFTGL+G +HFR   L      RIVNVVGK+YKE+ FW    GF+   K D
Sbjct: 305 ILSSNFTGLSGQIHFRSGELLHSPKLRIVNVVGKKYKEIDFWLPKFGFSKGRKDD 359


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