BLASTX nr result

ID: Cephaelis21_contig00051243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051243
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    95   7e-18
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ...    94   1e-17
gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indi...    91   1e-16
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    91   1e-16
gb|EEC78920.1| hypothetical protein OsI_19335 [Oryza sativa Indi...    91   1e-16

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/108 (37%), Positives = 74/108 (68%)
 Frame = -2

Query: 325  FNQALLAKQLWRILTQPNLLMSRLLKS*YYPKGGLMTTDIRTQDSWLWKSWMGARKTLKG 146
            FNQALL KQ WR++  P+ L++R+LK+ Y+P    M  ++ +  S+LW+S++  R+ L+ 
Sbjct: 1148 FNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSFLWGRELLRK 1207

Query: 145  GLRYQVGDGKTIKIWYSPWLSNNPSFKPLLSKPEDCTLTWVAELMHTD 2
            G+R+++GDGK ++++  PW+   PSF+P+L +     L  V++L+H +
Sbjct: 1208 GVRWRIGDGKEVRVFIDPWVPGLPSFRPILRQGAPLFLR-VSDLLHNN 1254


>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31433076|gb|AAP54636.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 791

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/108 (41%), Positives = 69/108 (63%)
 Frame = -2

Query: 325 FNQALLAKQLWRILTQPNLLMSRLLKS*YYPKGGLMTTDIRTQDSWLWKSWMGARKTLKG 146
           FNQALLA+Q WR++T P+ L +R+LK+ Y+P G L+ T   +  S  W+S       LK 
Sbjct: 271 FNQALLARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKK 330

Query: 145 GLRYQVGDGKTIKIWYSPWLSNNPSFKPLLSKPEDCTLTWVAELMHTD 2
           G+ ++VG+G +I+IW  PWL  + S +P+  K  +C L WV++L+  D
Sbjct: 331 GIIWRVGNGNSIRIWRDPWLPRDHSRRPITGK-ANCRLKWVSDLITED 377


>gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group]
          Length = 754

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/105 (40%), Positives = 68/105 (64%)
 Frame = -2

Query: 325 FNQALLAKQLWRILTQPNLLMSRLLKS*YYPKGGLMTTDIRTQDSWLWKSWMGARKTLKG 146
           FNQALLA+Q WR++  P+ L +R+LK+ Y+P G L+ T      S +WK+       LK 
Sbjct: 534 FNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKE 593

Query: 145 GLRYQVGDGKTIKIWYSPWLSNNPSFKPLLSKPEDCTLTWVAELM 11
           G+ +++G+GK+++IW  PWL  + S +P+  K  +C L WV++L+
Sbjct: 594 GIIWRIGNGKSVRIWRDPWLPRDFSRRPITRK-GNCRLKWVSDLL 637


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/105 (40%), Positives = 68/105 (64%)
 Frame = -2

Query: 325  FNQALLAKQLWRILTQPNLLMSRLLKS*YYPKGGLMTTDIRTQDSWLWKSWMGARKTLKG 146
            FNQALLA+Q WR++  P+ L +R+LK+ Y+P G L+ T      S +WK+       LK 
Sbjct: 1564 FNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKE 1623

Query: 145  GLRYQVGDGKTIKIWYSPWLSNNPSFKPLLSKPEDCTLTWVAELM 11
            G+ +++G+GK+++IW  PWL  + S +P+  K  +C L WV++L+
Sbjct: 1624 GIIWRIGNGKSVRIWRDPWLPRDFSRRPITRK-GNCRLKWVSDLL 1667



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/71 (40%), Positives = 46/71 (64%)
 Frame = -2

Query: 325  FNQALLAKQLWRILTQPNLLMSRLLKS*YYPKGGLMTTDIRTQDSWLWKSWMGARKTLKG 146
            FNQALLA+Q WR++  P+ L +R+LK+ Y+P G L+ T      S +WK+       LK 
Sbjct: 866  FNQALLARQAWRLIVNPDSLCARVLKAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKE 925

Query: 145  GLRYQVGDGKT 113
            G+ +++G+GK+
Sbjct: 926  GIIWRIGNGKS 936


>gb|EEC78920.1| hypothetical protein OsI_19335 [Oryza sativa Indica Group]
           gi|222630991|gb|EEE63123.1| hypothetical protein
           OsJ_17931 [Oryza sativa Japonica Group]
          Length = 616

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/104 (43%), Positives = 66/104 (63%)
 Frame = -2

Query: 325 FNQALLAKQLWRILTQPNLLMSRLLKS*YYPKGGLMTTDIRTQDSWLWKSWMGARKTLKG 146
           FNQALL++Q WR++  P+ L +R+LK+ YYP G L+ T      S  WK+       LK 
Sbjct: 381 FNQALLSRQAWRLIDNPDSLCARVLKAKYYPNGSLVDTSFSGCASPCWKAIEFGLALLKE 440

Query: 145 GLRYQVGDGKTIKIWYSPWLSNNPSFKPLLSKPEDCTLTWVAEL 14
           G+ ++VG+GK+I+IW  PWL  + S +P+  K  +C L WV+EL
Sbjct: 441 GIIWRVGNGKSIRIWRDPWLPRDFSRRPITRK-NNCRLKWVSEL 483


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