BLASTX nr result

ID: Cephaelis21_contig00051056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00051056
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_605811.1| ORFIII [Banana streak virus] gi|68566426|gb|AAY...    97   1e-18
ref|YP_233110.1| putative polyprotein [Banana streak virus strai...    97   2e-18
ref|YP_004442839.1| polyprotein [Banana streak IM virus] gi|3310...    97   2e-18
gb|ADV58682.1| polyprotein [Banana streak IM virus]                    97   2e-18
ref|YP_233107.1| polyprotein [Banana streak GF virus] gi|4045727...    94   9e-18

>ref|YP_605811.1| ORFIII [Banana streak virus] gi|68566426|gb|AAY99427.1| ORFIII
            [Banana streak virus Acuminata Yunnan]
          Length = 1900

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/93 (51%), Positives = 61/93 (65%)
 Frame = +1

Query: 7    VRKSTHYDGKPHKTHVXXXXXXXXXXXXXSCRCFTCGEPGHYASQCPLHNKKDVHRYSIA 186
            VRKST Y GKPHK+HV              C+CF CG+ GH+AS+CP + KK +HR  I 
Sbjct: 735  VRKSTSYKGKPHKSHVRIDKKKHLLMKRKDCKCFACGDVGHFASECP-NPKKLMHRVQIL 793

Query: 187  QNLTLPDDFEIMSVGMDEIDVCDIYSLLNEGED 285
            Q+L L D  +++SVG DE DV DIYS ++EGED
Sbjct: 794  QSLELDDGIDVISVGFDESDVSDIYS-VSEGED 825


>ref|YP_233110.1| putative polyprotein [Banana streak virus strain Acuminata Vietnam]
            gi|53830363|gb|AAU95075.1| putative polyprotein [Banana
            streak virus strain Acuminata Vietnam]
          Length = 1898

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/93 (51%), Positives = 61/93 (65%)
 Frame = +1

Query: 7    VRKSTHYDGKPHKTHVXXXXXXXXXXXXXSCRCFTCGEPGHYASQCPLHNKKDVHRYSIA 186
            VRKST Y GKPHK+HV              C+CF CG+ GH+AS+CP + KK +HR  I 
Sbjct: 733  VRKSTSYKGKPHKSHVRIDKKKHLLMKRKDCKCFACGDIGHFASECP-NPKKLMHRVQIL 791

Query: 187  QNLTLPDDFEIMSVGMDEIDVCDIYSLLNEGED 285
            Q+L L D  +++SVG DE DV DIYS ++EGED
Sbjct: 792  QSLELDDGIDVISVGFDESDVSDIYS-VSEGED 823


>ref|YP_004442839.1| polyprotein [Banana streak IM virus] gi|331029471|gb|AEC49890.1|
           polyprotein [Banana streak IM virus]
          Length = 1870

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/93 (51%), Positives = 61/93 (65%)
 Frame = +1

Query: 7   VRKSTHYDGKPHKTHVXXXXXXXXXXXXXSCRCFTCGEPGHYASQCPLHNKKDVHRYSIA 186
           VRKST Y GKPHK+HV              C+CF CG+ GH+AS+CP + KK +HR  I 
Sbjct: 722 VRKSTSYKGKPHKSHVRIDKKKHLTMKRKDCKCFACGDIGHFASECP-NPKKLMHRVQIL 780

Query: 187 QNLTLPDDFEIMSVGMDEIDVCDIYSLLNEGED 285
           Q+L L D  +++SVG DE DV DIYS ++EGED
Sbjct: 781 QSLELEDGIDVISVGFDESDVSDIYS-VSEGED 812


>gb|ADV58682.1| polyprotein [Banana streak IM virus]
          Length = 1870

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/93 (51%), Positives = 61/93 (65%)
 Frame = +1

Query: 7   VRKSTHYDGKPHKTHVXXXXXXXXXXXXXSCRCFTCGEPGHYASQCPLHNKKDVHRYSIA 186
           VRKST Y GKPHK+HV              C+CF CG+ GH+AS+CP + KK +HR  I 
Sbjct: 722 VRKSTSYKGKPHKSHVRIDKKKHLTMKRKDCKCFACGDIGHFASECP-NPKKLMHRVQIL 780

Query: 187 QNLTLPDDFEIMSVGMDEIDVCDIYSLLNEGED 285
           Q+L L D  +++SVG DE DV DIYS ++EGED
Sbjct: 781 QSLELEDGIDVISVGFDESDVSDIYS-VSEGED 812


>ref|YP_233107.1| polyprotein [Banana streak GF virus] gi|40457271|gb|AAR86692.1|
           polyprotein III [Banana streak GF virus]
          Length = 1832

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/93 (49%), Positives = 60/93 (64%)
 Frame = +1

Query: 7   VRKSTHYDGKPHKTHVXXXXXXXXXXXXXSCRCFTCGEPGHYASQCPLHNKKDVHRYSIA 186
           VRK+T Y GKPHK+H+              C+CF CGE GHYAS+C  + KK  HR +I 
Sbjct: 718 VRKNTSYKGKPHKSHIRIGKQKHLNLRKKDCKCFACGETGHYASEC-TNPKKFTHRVAIL 776

Query: 187 QNLTLPDDFEIMSVGMDEIDVCDIYSLLNEGED 285
           ++L L +  E++SVGMDE DV DIYS ++E ED
Sbjct: 777 ESLDLQEGLEVVSVGMDESDVSDIYS-ISENED 808


Top