BLASTX nr result

ID: Cephaelis21_contig00050947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050947
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   149   2e-34
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   149   2e-34
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   149   2e-34
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   145   4e-33
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...   139   2e-31

>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/140 (51%), Positives = 96/140 (68%)
 Frame = +2

Query: 11   LNGKSSGYVLPSRGIR*GDPLSPYLFLICSEVFSHLIQEASKAGRFHGLRTSRNGPSVSH 190
            +NG+ S    P RG+R GDPLSPYLFL+C+E FS L+ +  + GR HG+R  +  PSVSH
Sbjct: 820  VNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 879

Query: 191  LFFADDSLLFCKTNVAHANSLKNILEQYEKCSGQLVNLQKSSILFSKNTPVQLKGEICAI 370
            L FADDSL+ C+ N   A  L+ IL+ YE+CSGQ++N  KS+++FS NT    KG + A 
Sbjct: 880  LLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAA 939

Query: 371  LSGIQEQTRAKYLGLPLVVG 430
            L+  +E T  KYLGLP+ VG
Sbjct: 940  LNMQRETTNEKYLGLPVFVG 959


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/140 (51%), Positives = 96/140 (68%)
 Frame = +2

Query: 11   LNGKSSGYVLPSRGIR*GDPLSPYLFLICSEVFSHLIQEASKAGRFHGLRTSRNGPSVSH 190
            +NG+ S    P RG+R GDPLSPYLFL+C+E FS L+ +  + GR HG+R  +  PSVSH
Sbjct: 848  VNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 907

Query: 191  LFFADDSLLFCKTNVAHANSLKNILEQYEKCSGQLVNLQKSSILFSKNTPVQLKGEICAI 370
            L FADDSL+ C+ N   A  L+ IL+ YE+CSGQ++N  KS+++FS NT    KG + A 
Sbjct: 908  LLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAA 967

Query: 371  LSGIQEQTRAKYLGLPLVVG 430
            L+  +E T  KYLGLP+ VG
Sbjct: 968  LNMQRETTNEKYLGLPVFVG 987


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/140 (51%), Positives = 96/140 (68%)
 Frame = +2

Query: 11   LNGKSSGYVLPSRGIR*GDPLSPYLFLICSEVFSHLIQEASKAGRFHGLRTSRNGPSVSH 190
            +NG+ S    P RG+R GDPLSPYLFL+C+E FS L+ +  + GR HG+R  +  PSVSH
Sbjct: 816  VNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 875

Query: 191  LFFADDSLLFCKTNVAHANSLKNILEQYEKCSGQLVNLQKSSILFSKNTPVQLKGEICAI 370
            L FADDSL+ C+ N   A  L+ IL+ YE+CSGQ++N  KS+++FS NT    KG + A 
Sbjct: 876  LLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAA 935

Query: 371  LSGIQEQTRAKYLGLPLVVG 430
            L+  +E T  KYLGLP+ VG
Sbjct: 936  LNMQRETTNEKYLGLPVFVG 955


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/140 (50%), Positives = 95/140 (67%)
 Frame = +2

Query: 11   LNGKSSGYVLPSRGIR*GDPLSPYLFLICSEVFSHLIQEASKAGRFHGLRTSRNGPSVSH 190
            +NG+ S    P RG+R GDPLSPYLFL+C+E FS L+ +  + GR HG+R  +  PSVSH
Sbjct: 875  VNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 934

Query: 191  LFFADDSLLFCKTNVAHANSLKNILEQYEKCSGQLVNLQKSSILFSKNTPVQLKGEICAI 370
            L FADDSL+ C+ N   A  L+ IL+ YE+CSGQ++N  KS+++FS NT    K  + A 
Sbjct: 935  LLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAA 994

Query: 371  LSGIQEQTRAKYLGLPLVVG 430
            L+  +E T  +YLGLP+ VG
Sbjct: 995  LNMQRETTNERYLGLPVFVG 1014


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/140 (50%), Positives = 91/140 (65%)
 Frame = +2

Query: 11  LNGKSSGYVLPSRGIR*GDPLSPYLFLICSEVFSHLIQEASKAGRFHGLRTSRNGPSVSH 190
           +NG  +  ++PSRG+R GDP+SPYLFLIC+E FS L+  A + G   G++  +  PSVSH
Sbjct: 294 VNGDLTDQIIPSRGLRQGDPISPYLFLICAEGFSSLLYAAEERGDLSGVKVCQQAPSVSH 353

Query: 191 LFFADDSLLFCKTNVAHANSLKNILEQYEKCSGQLVNLQKSSILFSKNTPVQLKGEICAI 370
           L FADDSLL  K N   A  L+N+L  YE CSGQ+VN  KSSI+FSKNT    +  +  I
Sbjct: 354 LLFADDSLLLFKVNERSAQCLQNVLNLYESCSGQIVNKDKSSIMFSKNTSQADRKMVMEI 413

Query: 371 LSGIQEQTRAKYLGLPLVVG 430
           L    E    KYLGLP+ +G
Sbjct: 414 LDISTEARNEKYLGLPVYMG 433


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