BLASTX nr result

ID: Cephaelis21_contig00050874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050874
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    80   1e-13
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    79   4e-13
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    79   4e-13
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    78   6e-13
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    78   6e-13

>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/124 (33%), Positives = 63/124 (50%)
 Frame = +2

Query: 5   LMHTDGSSWNSDLMNSLFTPQDAAIILQTPISKLGNKDRLVWHHTNNGRYTVDSGYKWTA 184
           L++ +G SWN  ++ S+F PQDAA IL  P+      D  +W  T  G YTV S Y+  +
Sbjct: 41  LLNLEGLSWNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICS 100

Query: 185 SQRTNHLAAAETSTRREEDQKM*KSLWGLKIKGKIKHFL*RAYHNILPTKIQLKHKGTPV 364
                H +A   S+          ++W L I  +++ FL R  HN LPT++ L  +G   
Sbjct: 101 DLLHPHDSAHNNSSW--------MNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQC 152

Query: 365 DEIC 376
           +E C
Sbjct: 153 EESC 156


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2   ELMHTDGSSWNSDLMNSLFTPQDAAIILQTPISKLGNKDRLVWHHTNNGRYTVDSGYKWT 181
           EL+     +W+ DL++  F  +D A I   P+  +  +D L WH    G +TV S YK  
Sbjct: 158 ELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQ 216

Query: 182 AS--QRTNHLAAAETSTRREEDQKM*KSLWGLKIKGKIKHFL*RAYHNILPTKIQLKHKG 355
               +R +       S     D    K LW L + GKIKHFL R  HN L  +  L+H+G
Sbjct: 217 REMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRG 276

Query: 356 TPVDEICKSCG 388
             VD  C  CG
Sbjct: 277 MDVDTRCVMCG 287


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2    ELMHTDGSSWNSDLMNSLFTPQDAAIILQTPISKLGNKDRLVWHHTNNGRYTVDSGYKWT 181
            EL+     +W+ DL++  F  +D A I   P+  +  +D L WH    G +TV S YK  
Sbjct: 1191 ELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQ 1249

Query: 182  AS--QRTNHLAAAETSTRREEDQKM*KSLWGLKIKGKIKHFL*RAYHNILPTKIQLKHKG 355
                +R +       S     D    K LW L + GKIKHFL R  HN L  +  L+H+G
Sbjct: 1250 REMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRG 1309

Query: 356  TPVDEICKSCG 388
              VD  C  CG
Sbjct: 1310 MDVDTRCVMCG 1320


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2    ELMHTDGSSWNSDLMNSLFTPQDAAIILQTPISKLGNKDRLVWHHTNNGRYTVDSGYKWT 181
            EL+     +W+ DL++  F  +D A I   P+  +  +D L WH    G +TV S YK  
Sbjct: 1218 ELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQ 1276

Query: 182  AS--QRTNHLAAAETSTRREEDQKM*KSLWGLKIKGKIKHFL*RAYHNILPTKIQLKHKG 355
                +R +       S     D    K LW L + GKIKHFL R  HN L  +  L H+G
Sbjct: 1277 REMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRG 1336

Query: 356  TPVDEICKSCG 388
              VD  C  CG
Sbjct: 1337 MDVDTRCVMCG 1347


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2    ELMHTDGSSWNSDLMNSLFTPQDAAIILQTPISKLGNKDRLVWHHTNNGRYTVDSGYKWT 181
            EL+     +W+ DL++  F  +D A I   P+  +  +D L WH    G +TV S YK  
Sbjct: 1163 ELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQ 1221

Query: 182  AS--QRTNHLAAAETSTRREEDQKM*KSLWGLKIKGKIKHFL*RAYHNILPTKIQLKHKG 355
                +R +       S     D    K LW L + GKIKHFL R  HN L  +  L H+G
Sbjct: 1222 REMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRG 1281

Query: 356  TPVDEICKSCG 388
              VD  C  CG
Sbjct: 1282 MDVDTRCVMCG 1292


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