BLASTX nr result

ID: Cephaelis21_contig00050873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050873
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   164   5e-39
ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...   156   2e-36
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   155   4e-36
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/163 (50%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
 Frame = -2

Query: 488  LDAAQLIFDRMLIRNLVSWNAMILGHCIHGNPKDGLNLYNKMISGNSCXXXXXXXXXXXX 309
            +D A++++DRM   NLV WNAMILGHCIHGN +DGL L+ +M+ G               
Sbjct: 653  VDVARVVYDRMTKXNLVCWNAMILGHCIHGNAEDGLKLFEEMVDGIRSEDGEINLDKGIK 712

Query: 308  XXXDHNNIVPDEVTFIGLLLACAGEGQLTEGWNYFAQMVEVFGLKPNFAHYWCMANILDR 129
                   ++PDE+TFIG+L ACA EG L EG +Y++QM+  F +KPNFAHYWCMAN+   
Sbjct: 713  RIEGQG-LJPDEITFIGVLCACAREGLLAEGRSYYSQMINTFHIKPNFAHYWCMANLFAG 771

Query: 128  VDRRKEAIELLRNMP-VSEDASPEMSLWAGLFRSCHFEGDVAL 3
            V   +EA E+LR+MP   ED S E S WAGL  SC F+G V L
Sbjct: 772  VGLVQEAEEILRSMPEEDEDLSWESSFWAGLLSSCRFQGXVFL 814


>ref|XP_004158900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 547

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
 Frame = -2

Query: 488 LDAAQLIFDRMLIRNLVSWNAMILGHCIHGNPKDGLNLYNKMISGNSCXXXXXXXXXXXX 309
           +  A+ +FDR++IRNLV+WNAMILGH +HGNPKDGL L+ +M+                 
Sbjct: 331 VSVARRVFDRLMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREINEETGNGKKFK 390

Query: 308 XXXDHNNIVPDEVTFIGLLLACAGEGQLTEGWNYFAQMVEVFGLKPNFAHYWCMANILDR 129
                  + PD++TFIG+L ACA  G L +  NYF +M+ VF ++PNF HYWC+AN+   
Sbjct: 391 QDEGKRKVFPDQITFIGVLCACARAGLLKDAENYFDEMINVFLVRPNFGHYWCLANVYVA 450

Query: 128 VDRRKEAIELLRNMPV-SEDASPEMSLWAGLFRSCHFEGDVAL 3
           V   ++A+E+LRNMP  +ED S E  +W  L  +C F GDV+L
Sbjct: 451 VGLIEQAVEILRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSL 493


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score =  156 bits (394), Expect = 2e-36
 Identities = 74/163 (45%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
 Frame = -2

Query: 488 LDAAQLIFDRMLIRNLVSWNAMILGHCIHGNPKDGLNLYNKMISGNSCXXXXXXXXXXXX 309
           +  A+ +FDR++IRNLV+WNAMILGH +HGNPKDGL L+ +M+                 
Sbjct: 330 VSVARRVFDRLMIRNLVTWNAMILGHSLHGNPKDGLELFEEMVGELREINEETGNGKKFK 389

Query: 308 XXXDHNNIVPDEVTFIGLLLACAGEGQLTEGWNYFAQMVEVFGLKPNFAHYWCMANILDR 129
                  + PD++TFIG+L ACA  G L +  NYF +M+ VF ++PNF HYWC+AN+   
Sbjct: 390 QDEGKRKVFPDQITFIGVLCACARAGLLKDAENYFDEMINVFLVRPNFGHYWCLANVYVA 449

Query: 128 VDRRKEAIELLRNMPV-SEDASPEMSLWAGLFRSCHFEGDVAL 3
           V   ++A+E+LRNMP  +ED S E  +W  L  +C F GDV+L
Sbjct: 450 VGLIEQAVEILRNMPEDNEDFSSESVVWIDLLTTCRFVGDVSL 492


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  155 bits (391), Expect = 4e-36
 Identities = 82/163 (50%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
 Frame = -2

Query: 488 LDAAQLIFDRMLIRNLVSWNAMILGHCIHGNPKDGLNLYNKMISGNSCXXXXXXXXXXXX 309
           ++AA  +F+RM  RNLVSWNAMILGHCIHGNP+DGL+L++ M+ G               
Sbjct: 320 VEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMV-GMERVKGEVEVDESSS 378

Query: 308 XXXDHNNIVPDEVTFIGLLLACAGEGQLTEGWNYFAQMVEVFGLKPNFAHYWCMANILDR 129
                  ++PDE+TFIG+L ACA    L+EG +YF QM++VFGLKPNFAH+WCMAN+L  
Sbjct: 379 ADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQMIDVFGLKPNFAHFWCMANLLAN 438

Query: 128 VDRRKEAIELLRNMPVSED-ASPEMSLWAGLFRSCHFEGDVAL 3
           V    EA E L+NM   +   S E  LWA L   C F+ DV L
Sbjct: 439 VGLIDEAEECLKNMAKFDGYISHESLLWASLLGLCRFKRDVYL 481


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/163 (47%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
 Frame = -2

Query: 488 LDAAQLIFDRMLIRNLVSWNAMILGHCIHGNPKDGLNLYNKMISGNSCXXXXXXXXXXXX 309
           ++ A+ IFD+++ RNL  WNAMILGHC+HGNP DGL L+  M+                 
Sbjct: 330 VEMARRIFDKVVRRNLGCWNAMILGHCLHGNPDDGLELFKDMVD--------------RA 375

Query: 308 XXXDHNNIVPDEVTFIGLLLACAGEGQLTEGWNYFAQMVEVFGLKPNFAHYWCMANILDR 129
                +++ PDEVTFIG+L ACA  G LTEG N+F+QM+   GLKPNFAH+WCMAN+  R
Sbjct: 376 GLGKRDSVHPDEVTFIGVLCACARAGLLTEGKNFFSQMIYNHGLKPNFAHFWCMANLYAR 435

Query: 128 VDRRKEAIELLRNMPVSEDASP-EMSLWAGLFRSCHFEGDVAL 3
               +EA ++LR     E+  P E  +WA L  SC F+G+VAL
Sbjct: 436 AGLIQEAEDILRTTQEEEEDMPLESLVWANLLNSCRFQGNVAL 478


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