BLASTX nr result

ID: Cephaelis21_contig00050834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050834
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   106   2e-21
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]   106   2e-21
emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]   103   2e-20
gb|AAX95899.1| retrotransposon protein, putative, Ty3-gypsy sub-...   102   3e-20
gb|ABA98841.1| retrotransposon protein, putative, Ty3-gypsy subc...   101   7e-20

>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/102 (47%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
 Frame = -3

Query: 301  ANYLDISWGRW---STEISR*IISVRNLEIKNKVLKEVHCSKYTVHPENNKMYQDLKRRF 131
            A  +D +W  +   S      +   +++E++N++L + H +KYT+HP N KMYQDLKR+F
Sbjct: 1165 AGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQF 1224

Query: 130  FWDNMKRDIAQYISKCLTCQQVNAEH*KPADLLQPLEVPE*K 5
             W  MKRDIAQ+++ C  CQQV AEH +PA+LLQPL +P+ K
Sbjct: 1225 XWSGMKRDIAQFVANCQICQQVKAEHQRPAELLQPLPIPKWK 1266


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score =  106 bits (264), Expect = 2e-21
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = -3

Query: 235  RNLEIKNKVLKEVHCSKYTVHPENNKMYQDLKRRFFWDNMKRDIAQYISKCLTCQQVNAE 56
            +++E++N++L + H +KYT+HP N KMYQDLKR+F+W  MKRDIAQ++  C  CQQV AE
Sbjct: 1094 KDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFWWSGMKRDIAQFVXNCQICQQVKAE 1153

Query: 55   H*KPADLLQPLEVPE*K 5
            H +PA LLQPL +PE K
Sbjct: 1154 HQRPAGLLQPLPIPEWK 1170


>emb|CAN61694.1| hypothetical protein VITISV_026655 [Vitis vinifera]
          Length = 1313

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 3/102 (2%)
 Frame = -3

Query: 301  ANYLDISWGRW---STEISR*IISVRNLEIKNKVLKEVHCSKYTVHPENNKMYQDLKRRF 131
            A  +D +W  +   S      +   +++E++N++L + H +KYT+HP N KMYQDLKR+F
Sbjct: 859  AGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQF 918

Query: 130  FWDNMKRDIAQYISKCLTCQQVNAEH*KPADLLQPLEVPE*K 5
            +W  MKRDIAQ+++    CQQV AEH +PA LLQPL +PE K
Sbjct: 919  WWSGMKRDIAQFVANFQICQQVKAEHQRPAGLLQPLPIPEWK 960


>gb|AAX95899.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77549663|gb|ABA92460.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1686

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/76 (57%), Positives = 61/76 (80%)
 Frame = -3

Query: 232  NLEIKNKVLKEVHCSKYTVHPENNKMYQDLKRRFFWDNMKRDIAQYISKCLTCQQVNAEH 53
            N ++K+ +LKE H + Y++HP + KMYQDLK RF+W +MKR+IA+Y++ C  CQ+V AEH
Sbjct: 1287 NKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEH 1346

Query: 52   *KPADLLQPLEVPE*K 5
             KPADLLQPL++PE K
Sbjct: 1347 QKPADLLQPLKIPEWK 1362


>gb|ABA98841.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1470

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/76 (57%), Positives = 60/76 (78%)
 Frame = -3

Query: 232  NLEIKNKVLKEVHCSKYTVHPENNKMYQDLKRRFFWDNMKRDIAQYISKCLTCQQVNAEH 53
            N ++KN +LKE H + Y++HP + KMYQDLK RF+W +MKR+IA+Y++ C  CQ+V AEH
Sbjct: 1058 NKDLKNAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDICQRVKAEH 1117

Query: 52   *KPADLLQPLEVPE*K 5
             KPA LLQPL++PE K
Sbjct: 1118 QKPAGLLQPLKIPEWK 1133


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