BLASTX nr result

ID: Cephaelis21_contig00050756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050756
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi...   180   1e-43
ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ...   178   5e-43
ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42

>ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|222857847|gb|EEE95394.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  184 bits (466), Expect = 8e-45
 Identities = 84/111 (75%), Positives = 97/111 (87%)
 Frame = +3

Query: 3   MRSGKVSKPPGCSWIEFEKKVHMFTGGENAPHPEHHMIVKKLEELGALMREAGYVPDGSF 182
           MR+  VSK PGCSWIE + KVHMFTGG +A HPEH MI+KKLE+LGA +REAGY PDGSF
Sbjct: 559 MRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSF 618

Query: 183 VLHDLDEEEKVRSLGHHSEKLAIAYGLLKLPEGIPIRVMKNLRVCGDCHAA 335
           V+HD+DEE+KV SL HHSEK+A+AYGLLK+P G PIRVMKNLRVCGDCH+A
Sbjct: 619 VMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSA 669


>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/111 (73%), Positives = 98/111 (88%)
 Frame = +3

Query: 3   MRSGKVSKPPGCSWIEFEKKVHMFTGGENAPHPEHHMIVKKLEELGALMREAGYVPDGSF 182
           +++  V+K PGCSWIE EKKVHMFTGG++  HPE  +I+K LE+LG L+REAGY PDGSF
Sbjct: 567 IKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSF 626

Query: 183 VLHDLDEEEKVRSLGHHSEKLAIAYGLLKLPEGIPIRVMKNLRVCGDCHAA 335
           VLHD+DEEEK  SLG+HSEKLA+AYGLLK+PEG+PIRVMKNLRVCGDCH+A
Sbjct: 627 VLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSA 677


>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/111 (74%), Positives = 96/111 (86%)
 Frame = +3

Query: 3   MRSGKVSKPPGCSWIEFEKKVHMFTGGENAPHPEHHMIVKKLEELGALMREAGYVPDGSF 182
           MR  KVSK PGCSWIE EK+VHMFTGG +  HPE   I+K LE+L  ++REAGY PD SF
Sbjct: 559 MRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSF 618

Query: 183 VLHDLDEEEKVRSLGHHSEKLAIAYGLLKLPEGIPIRVMKNLRVCGDCHAA 335
           VLHD+DEEEKVRSLGHHSE+LA+A+GLLK+PEG+PIRVMKNLRVCGDCH+A
Sbjct: 619 VLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSA 669


>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498663|gb|AES79866.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  178 bits (451), Expect = 5e-43
 Identities = 80/107 (74%), Positives = 93/107 (86%)
 Frame = +3

Query: 15  KVSKPPGCSWIEFEKKVHMFTGGENAPHPEHHMIVKKLEELGALMREAGYVPDGSFVLHD 194
           +V K PGCSWIE EKKVHMFTGG++  HPE HMI + LE+L   +REAGY PDGSFVLHD
Sbjct: 567 RVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHD 626

Query: 195 LDEEEKVRSLGHHSEKLAIAYGLLKLPEGIPIRVMKNLRVCGDCHAA 335
           +DEEEK  SLG+HSE+LA+AYGLLK+PEG+PIRVMKNLRVCGDCH+A
Sbjct: 627 VDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSA 673


>ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|222871483|gb|EEF08614.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/110 (72%), Positives = 95/110 (86%)
 Frame = +3

Query: 3   MRSGKVSKPPGCSWIEFEKKVHMFTGGENAPHPEHHMIVKKLEELGALMREAGYVPDGSF 182
           MR+  + K PGCSWIE +KKVH+F+GG +  HPEH MI+KKL +LGAL+REAGY PDGSF
Sbjct: 426 MRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSF 485

Query: 183 VLHDLDEEEKVRSLGHHSEKLAIAYGLLKLPEGIPIRVMKNLRVCGDCHA 332
           V+HD+DEEEKV SL  HSEKLA+AYGLLK+PEG+PIRVMKNLRVCGD H+
Sbjct: 486 VMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHS 535


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