BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050688
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      61   1e-07
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                55   6e-06

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
 Frame = +3

Query: 54   IP*SQNKHTDALSKLASSIFSQLNKKVLVEILQDCSINSQPI*MIEEVG--NNWMTPIFQ 227
            IP S+N   D LSKL SS    +++ VLV+I    SI ++ + M+ ++     WMTPI +
Sbjct: 845  IPRSENNRADTLSKLTSSTIKNVSRTVLVDIRNAKSI-TETVGMVGDIEAETTWMTPIMK 903

Query: 228  YLTVDILLSDKLKAGRLSL*STHYVVQDEVLYRRSYLQSLQRCMEPIQA 374
            Y     L  D+  + ++   +  Y+V +  LYRRS ++ L +C+ P  A
Sbjct: 904  YKLTKGLPEDRSLSQKIKRIAARYLVFEGELYRRSVIRPLLKCVGPADA 952


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/124 (29%), Positives = 61/124 (49%)
 Frame = +3

Query: 9    VRHF*HTFQVV*FIYIP*SQNKHTDALSKLASSIFSQLNKKVLVEILQDCSINSQPI*MI 188
            V++  + F+ + F ++    N   DALS+LA+      ++  +   L   S+ ++   M 
Sbjct: 1421 VKNLLNRFKEISFQHVRRENNTRADALSRLATLKKKGAHRSAIHVTLAKPSVGTEEC-MA 1479

Query: 189  EEVGNNWMTPIFQYLTVDILLSDKLKAGRLSL*STHYVVQDEVLYRRSYLQSLQRCMEPI 368
             +   NWMTPI QYLT  +   D      + L +  Y++  E LYRR Y + L +C+ P 
Sbjct: 1480 TDTQPNWMTPIKQYLTDGVC--DPHLEKTMKLQAARYILIGEDLYRRGYSRPLLKCLGPE 1537

Query: 369  QANY 380
            Q  Y
Sbjct: 1538 QVTY 1541