BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050660
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     166   1e-39
gb|AAT44283.1| putative polyprotein [Oryza sativa Japonica Group]     160   1e-37
gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3...   159   2e-37
emb|CAE03255.1| OSJNBa0011J08.10 [Oryza sativa Japonica Group]        159   2e-37
gb|ABA94908.1| retrotransposon protein, putative, Ty3-gypsy subc...   159   2e-37

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  166 bits (421), Expect = 1e-39
 Identities = 84/142 (59%), Positives = 104/142 (73%)
 Frame = +2

Query: 5   TLRKANMKLNPQKCTFGVGSGKFLGYMISKRGIDANPEKVQAILNMAPPRTIKEVQKLTR 184
           +LRK  MKLNP KC FGV +GKFLG ++S RGIDANPEKVQAIL++  PR  KEV  LT 
Sbjct: 487 SLRKYKMKLNPMKCNFGVRAGKFLGVLVSARGIDANPEKVQAILDLLEPRNRKEVMMLTG 546

Query: 185 CLATLSRILSRSADRSFAFFQILRNMKNFQWTEESQQAFNELKAHLGTLPTLAVPNPGEA 364
            +A L+R +SRS D+S  FF++L+  K+F W EE   AF +LKAHL TLPTL+ P  GE 
Sbjct: 547 RMAALARFISRSTDKSTPFFKVLKGNKDFSWGEEQSTAFRQLKAHLITLPTLSRPMLGET 606

Query: 365 LYLYLATSMNAVSAVLIQEMDK 430
           LYLY+A +   VSAV+I+E DK
Sbjct: 607 LYLYIAVTSATVSAVIIREEDK 628


>gb|AAT44283.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1741

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/143 (54%), Positives = 103/143 (72%)
 Frame = +2

Query: 2    ATLRKANMKLNPQKCTFGVGSGKFLGYMISKRGIDANPEKVQAILNMAPPRTIKEVQKLT 181
            A++R   MKLNP+KCTFGV SGK LG+M+S RGI ANPEKV AILNM PP + K+VQKLT
Sbjct: 1099 ASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVNAILNMKPPSSQKDVQKLT 1158

Query: 182  RCLATLSRILSRSADRSFAFFQILRNMKNFQWTEESQQAFNELKAHLGTLPTLAVPNPGE 361
             C+A LSR +SR  +R   FF++L+ + NFQW  E+Q+AF + K  L T P LA P+P E
Sbjct: 1159 GCMAALSRFVSRLGERGMPFFKLLKKIDNFQWGPEAQKAFEDFKKLLTTPPVLASPHPQE 1218

Query: 362  ALYLYLATSMNAVSAVLIQEMDK 430
             L LY++ +   +SAVL+ E ++
Sbjct: 1219 PLLLYVSATSQVMSAVLVVEREE 1241


>gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|20270061|gb|AAM18149.1|AC092172_9
            Putative gag-pol precursor [Oryza sativa Japonica Group]
            gi|31430891|gb|AAP52743.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1964

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/143 (55%), Positives = 101/143 (70%)
 Frame = +2

Query: 2    ATLRKANMKLNPQKCTFGVGSGKFLGYMISKRGIDANPEKVQAILNMAPPRTIKEVQKLT 181
            A++R   MKLNP+KCTFGV SGK LG+M+S RGI ANPEKV AILNM PP T K+VQKLT
Sbjct: 1129 ASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLT 1188

Query: 182  RCLATLSRILSRSADRSFAFFQILRNMKNFQWTEESQQAFNELKAHLGTLPTLAVPNPGE 361
             C+A LSR +SR  +R   FF++L+   NFQW  E+Q+AF +LK  L   P LA P+P E
Sbjct: 1189 GCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDLKQLLTKPPVLASPHPQE 1248

Query: 362  ALYLYLATSMNAVSAVLIQEMDK 430
             L LY++ +   VS VL+ E ++
Sbjct: 1249 PLLLYVSATSQVVSTVLVVEREE 1271


>emb|CAE03255.1| OSJNBa0011J08.10 [Oryza sativa Japonica Group]
          Length = 788

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/143 (53%), Positives = 101/143 (70%)
 Frame = +2

Query: 2   ATLRKANMKLNPQKCTFGVGSGKFLGYMISKRGIDANPEKVQAILNMAPPRTIKEVQKLT 181
           A++R   MKLNP+KC FGV SGK LG+M+S+RGI ANPEK+ AILNM PP T K+VQKLT
Sbjct: 165 ASIRAFRMKLNPEKCIFGVPSGKLLGFMVSQRGIQANPEKINAILNMKPPSTQKDVQKLT 224

Query: 182 RCLATLSRILSRSADRSFAFFQILRNMKNFQWTEESQQAFNELKAHLGTLPTLAVPNPGE 361
            C+A LSR +SR  +R   FF++L+   NFQW  E+Q+AF + K  + T P LA P+P E
Sbjct: 225 GCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLITTPPVLASPHPQE 284

Query: 362 ALYLYLATSMNAVSAVLIQEMDK 430
            L LY++ +   VS VL+ E +K
Sbjct: 285 PLLLYVSATSQVVSTVLVVEREK 307


>gb|ABA94908.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1994

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/143 (55%), Positives = 100/143 (69%)
 Frame = +2

Query: 2    ATLRKANMKLNPQKCTFGVGSGKFLGYMISKRGIDANPEKVQAILNMAPPRTIKEVQKLT 181
            A++R   MKLNP+KCTFGV SGK LG+M+S RGI ANPEKV AILNM PP T K+VQKLT
Sbjct: 1159 ASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLT 1218

Query: 182  RCLATLSRILSRSADRSFAFFQILRNMKNFQWTEESQQAFNELKAHLGTLPTLAVPNPGE 361
             C+A LSR +SR  +R   FF++L+   NFQW  E+Q+AF + K  L   P LA P+P E
Sbjct: 1219 GCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKQLLTKPPVLASPHPQE 1278

Query: 362  ALYLYLATSMNAVSAVLIQEMDK 430
             L LYL+ +   VS VL+ E ++
Sbjct: 1279 PLLLYLSATSQVVSTVLVVEREE 1301