BLASTX nr result

ID: Cephaelis21_contig00050580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050580
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002321513.1| polyprotein [Bougainvillea spectabilis chlor...    60   2e-07
gb|AEI98823.2| polyprotein [Grapevine vein-clearing virus]             58   9e-07
ref|YP_004732983.1| polyprotein [Grapevine vein-clearing virus]        58   9e-07
ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...    56   3e-06
ref|NP_758808.1| polyprotein [Taro bacilliform virus] gi|2581483...    56   3e-06

>ref|YP_002321513.1| polyprotein [Bougainvillea spectabilis chlorotic vein-banding virus]
            gi|154354401|gb|ABS76283.1| polyprotein [Bougainvillea
            spectabilis chlorotic vein-banding virus]
          Length = 2252

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/85 (37%), Positives = 45/85 (52%)
 Frame = -3

Query: 263  WNTTFSTWEQSTKLYLAHNNHLWTNKQDRVTAVENLLGPIEYTNFLTWKQVYIDEYNQMV 84
            +N     WE STK  L  N   + + + +V  VENLLG      FL WK  Y  +Y Q++
Sbjct: 883  YNEILDQWESSTKNLL--NGQQFDSNRSKVEYVENLLGSTAKKTFLQWKVAYPTDYQQLI 940

Query: 83   ELSDNPQIIFSKIRSLWFFEDANLG 9
             ++D+PQ I S IR ++  ED   G
Sbjct: 941  TVADDPQNITSMIRRIFTMEDPYTG 965


>gb|AEI98823.2| polyprotein [Grapevine vein-clearing virus]
          Length = 1941

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 47/88 (53%)
 Frame = -3

Query: 272 ITSWNTTFSTWEQSTKLYLAHNNHLWTNKQDRVTAVENLLGPIEYTNFLTWKQVYIDEYN 93
           + S     +TWE  T  +L   N  + + QDRV  +ENLLGP E   ++TW+  Y  EY 
Sbjct: 664 VASHADAITTWETITLNHLM--NISFDSLQDRVDYIENLLGPREREAWVTWRMAYDTEYR 721

Query: 92  QMVELSDNPQIIFSKIRSLWFFEDANLG 9
           Q+VELS  P+ + S I+ +    D   G
Sbjct: 722 QLVELSGEPRNVTSTIKRVLGINDPYTG 749


>ref|YP_004732983.1| polyprotein [Grapevine vein-clearing virus]
          Length = 1224

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/88 (37%), Positives = 47/88 (53%)
 Frame = -3

Query: 272 ITSWNTTFSTWEQSTKLYLAHNNHLWTNKQDRVTAVENLLGPIEYTNFLTWKQVYIDEYN 93
           + S     +TWE  T  +L   N  + + QDRV  +ENLLGP E   ++TW+  Y  EY 
Sbjct: 664 VASHADAITTWETITLNHLM--NISFDSLQDRVDYIENLLGPREREAWVTWRMAYDTEYR 721

Query: 92  QMVELSDNPQIIFSKIRSLWFFEDANLG 9
           Q+VELS  P+ + S I+ +    D   G
Sbjct: 722 QLVELSGEPRNVTSTIKRVLGINDPYTG 749


>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
           gi|258547408|gb|ACV74337.1| putative polyprotein
           [Pelargonium vein banding virus]
          Length = 1970

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/85 (36%), Positives = 44/85 (51%)
 Frame = -3

Query: 263 WNTTFSTWEQSTKLYLAHNNHLWTNKQDRVTAVENLLGPIEYTNFLTWKQVYIDEYNQMV 84
           +    S WE  T   L  N+  W N + RV  VENLLG  E   +  W+  Y  EY ++V
Sbjct: 693 YEEVISRWESITINLL--NDRTWDNNKARVIYVENLLGESEKKIWQQWRTTYTKEYEELV 750

Query: 83  ELSDNPQIIFSKIRSLWFFEDANLG 9
            ++D+PQ I S++R +   ED   G
Sbjct: 751 AIADDPQDITSQVRMVITLEDPYRG 775


>ref|NP_758808.1| polyprotein [Taro bacilliform virus]
           gi|25814833|gb|AAN75640.1|AF357836_3 polyprotein [taro
           bacilliform virus]
          Length = 1881

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/85 (29%), Positives = 46/85 (54%)
 Frame = -3

Query: 263 WNTTFSTWEQSTKLYLAHNNHLWTNKQDRVTAVENLLGPIEYTNFLTWKQVYIDEYNQMV 84
           +  T S WE  T   +  N  +W + + +   +ENLLG +E   ++ W+  Y+ EY+ +V
Sbjct: 487 YEDTISRWESITLNMM--NEKVWPSNEAKAKYMENLLGEMEKKTWIQWRTTYVSEYDALV 544

Query: 83  ELSDNPQIIFSKIRSLWFFEDANLG 9
           + SD  Q + S++R ++  +D   G
Sbjct: 545 QQSDETQNLLSQVRRIFLLQDPYQG 569


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