BLASTX nr result

ID: Cephaelis21_contig00050578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050578
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    85   7e-15
gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays]         57   1e-06
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...    55   5e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/108 (40%), Positives = 66/108 (61%)
 Frame = -1

Query: 332  LAVYWIAPPAAAWKLNVDGSALCPTGIICGGIVRRDALGNVLFADAVFFGQGTSLRAEAL 153
            + V WI PP    KLN DGS  C  G   GG + R+ALG V+ A  +  G+GTS  AEA+
Sbjct: 988  IRVNWIKPPTMFAKLNTDGS--CVNGRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAM 1045

Query: 152  ALLYGLQLCAQRGLQYVLVETNSQVLLLLLTFSTPYPWSLFAILSSIR 9
            ++L+G+QLC QRG+  ++ ET+S +L   +T +   PW ++  +  I+
Sbjct: 1046 SMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQ 1093


>gb|AFW65836.1| hypothetical protein ZEAMMB73_825751 [Zea mays]
          Length = 279

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
 Frame = -1

Query: 344 RRTSLAVYWIAPPAAAWKLNVDGSALCPTGIICGGIVRRDALGNVLFADA-VFFGQGTSL 168
           R   + + W  PPA  +K+N DGS L  +G+   G + R   G+ L A A    G  ++L
Sbjct: 106 RAPPMNLKWQPPPAGFYKINCDGSYLAKSGLGGWGCIIRGHDGSFLAAGAGTLTGISSTL 165

Query: 167 RAEALALLYGLQLCAQRGLQYVLVETNSQVLLLLLTFSTPYPWSLFAIL 21
            AE++A + GL+L    G+Q V++ET++ +L   LT S  Y  S   ++
Sbjct: 166 HAESVACMKGLELAVFLGMQNVMIETDAAILKTALT-SQEYDLSALGVV 213


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = -1

Query: 344 RRTSLAVYWIAPPAAAWKLNVDGSALCPTGIICGGIVRRDALGNVLFADA-VFFGQGTSL 168
           R   + + W  PPA  +K+N DGS    +G+   G + R   G  L A A    G  ++L
Sbjct: 299 RAPPMNLKWQPPPAGFYKINCDGSYRAKSGLGSWGCIIRGHDGGFLAAGAGALTGISSAL 358

Query: 167 RAEALALLYGLQLCAQRGLQYVLVETNSQVLLLLLTFSTPYPWSLFAIL 21
            AE++A + GL+L    G+Q V++ET++ +L   LT S  Y  S   ++
Sbjct: 359 HAESVACMKGLELAVFLGMQNVMIETDAAILKTALT-SQEYDLSALGVV 406


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