BLASTX nr result

ID: Cephaelis21_contig00050534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050534
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   146   1e-33
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....   142   3e-32

>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score =  159 bits (403), Expect = 2e-37
 Identities = 71/102 (69%), Positives = 86/102 (84%)
 Frame = -1

Query: 306 RIKLERECRLSEDFFLNVLKVYGNMGGRINSAIKTLFDMPNYKCWPTVKSFNFVLNLLVC 127
           RIK ER  RLS++FF +V+K+YGN+ GR+N AI TLFDMPNY CWP+VK+FNFVLNLLV 
Sbjct: 116 RIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVS 175

Query: 126 TKQFEVVHEVYMGASELGVEIDACSLNVMIKGLCQCGKFDAA 1
            K F+VVHEVYMGA +LG+EIDAC LN+++KGLCQ G  DAA
Sbjct: 176 AKMFDVVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAA 217


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  146 bits (369), Expect = 1e-33
 Identities = 63/101 (62%), Positives = 85/101 (84%)
 Frame = -1

Query: 303 IKLERECRLSEDFFLNVLKVYGNMGGRINSAIKTLFDMPNYKCWPTVKSFNFVLNLLVCT 124
           +K++++CRLS+ FF NV+KVYGN+ GR + A++TLFDMP + CWP+VK+FN VLN+LV  
Sbjct: 111 LKIDKQCRLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSA 170

Query: 123 KQFEVVHEVYMGASELGVEIDACSLNVMIKGLCQCGKFDAA 1
           K+F+VVH+VY GA ELGVEIDAC LN+++KGLC+ G  DAA
Sbjct: 171 KRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAA 211


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  145 bits (365), Expect = 4e-33
 Identities = 62/101 (61%), Positives = 85/101 (84%)
 Frame = -1

Query: 303 IKLERECRLSEDFFLNVLKVYGNMGGRINSAIKTLFDMPNYKCWPTVKSFNFVLNLLVCT 124
           +K++++CRLS+ FF NV+KVYGN+ G+ + A++TLFDMP + CWP+VK+FN VLN+LV  
Sbjct: 111 LKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSA 170

Query: 123 KQFEVVHEVYMGASELGVEIDACSLNVMIKGLCQCGKFDAA 1
           K+F+VVH+VY GA ELGVEIDAC LN+++KGLC+ G  DAA
Sbjct: 171 KRFDVVHKVYAGAPELGVEIDACCLNILVKGLCRSGNVDAA 211


>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/104 (63%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
 Frame = -1

Query: 309 ERIKLERECRLSEDFFLNVLKVYGNMGGRINSAIKTLFDMPN-YKCWPTVKSFNFVLNLL 133
           ++IKL++ CRLS DFF NV+K+YG + GRI  A++TLFDMP  Y CWP VKSFN VLNLL
Sbjct: 67  QKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPNVKSFNLVLNLL 126

Query: 132 VCTKQFEVVHEVYMGASELGVEIDACSLNVMIKGLCQCGKFDAA 1
           V  K F+VVHEVY+ A  LG+EID CSLN++IKGLC+ G  +AA
Sbjct: 127 VSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAA 170


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score =  142 bits (358), Expect = 3e-32
 Identities = 60/101 (59%), Positives = 82/101 (81%)
 Frame = -1

Query: 303 IKLERECRLSEDFFLNVLKVYGNMGGRINSAIKTLFDMPNYKCWPTVKSFNFVLNLLVCT 124
           IKLE+ CR SEDFF N++++YGN+ GRIN AI+ LF MP++ CWP+ KSFNF+LNLLV  
Sbjct: 121 IKLEKRCRFSEDFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSA 180

Query: 123 KQFEVVHEVYMGASELGVEIDACSLNVMIKGLCQCGKFDAA 1
           K F+ +H++++ A +LGVEIDAC LN++IKGLC+ G  +AA
Sbjct: 181 KLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221


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