BLASTX nr result

ID: Cephaelis21_contig00050533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050533
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             145   6e-33
emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]        140   2e-31
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                140   2e-31
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   140   2e-31
gb|AAL31077.1|AC091749_6 putative polyprotein [Oryza sativa Japo...   138   8e-31

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  145 bits (366), Expect = 6e-33
 Identities = 72/165 (43%), Positives = 110/165 (66%)
 Frame = +3

Query: 3    PFFQLLKRPKKKQINWTPEYEYTFQALKDHLQQLPVLFAPVPGDTLFFYLAVIYYTVSSV 182
            PF+ LLKR  + Q +W  + E  F+ LKD+L   P+L  P  G+TL+ Y+AV  + VSSV
Sbjct: 1078 PFYNLLKR--RAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSV 1135

Query: 183  LLHEDVSIQKPIYNVSKVLQGLELNYLMLEKFTLSLIHTSRRLFPYFQAHSVMVLTNHPL 362
            L+ ED   Q+PI+  SK L   E  Y ++EK  L+++ ++R+L PYFQ+H++ VLT+ PL
Sbjct: 1136 LVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQPL 1195

Query: 363  KGILNRSEISG*LTKWTIELGQYNLLFQPRSVIKGQVLTNFIIEI 497
            +  L+    SG +TKW +EL +Y++ F+PR  +K QVL +F+IE+
Sbjct: 1196 RVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIEL 1240


>emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
          Length = 1847

 Score =  140 bits (353), Expect = 2e-31
 Identities = 80/186 (43%), Positives = 105/186 (56%)
 Frame = +3

Query: 3    PFFQLLKRPKKKQINWTPEYEYTFQALKDHLQQLPVLFAPVPGDTLFFYLAVIYYTVSSV 182
            PFF+ L+   K   NWTPE +  F  LK +LQ  P L +  PG  L  YLA     VS+ 
Sbjct: 1191 PFFKTLRGAGK--FNWTPECQAAFDELKQYLQSTPALISTPPGSELLLYLAASPVAVSAA 1248

Query: 183  LLHEDVSIQKPIYNVSKVLQGLELNYLMLEKFTLSLIHTSRRLFPYFQAHSVMVLTNHPL 362
            L+ E    QKP+Y VS+ LQG +  Y+ +EK   +L+  SR+L  YFQAH V+V + +PL
Sbjct: 1249 LVQETEFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQYPL 1308

Query: 363  KGILNRSEISG*LTKWTIELGQYNLLFQPRSVIKGQVLTNFIIEISHLEHQVEHPAIQIP 542
              IL   EI+G L+KW  EL  +NL F  RS IK QVL NF+ E +             P
Sbjct: 1309 GEILRGKEITGRLSKWAAELSPFNLHFVARSAIKSQVLANFVAEWT-------------P 1355

Query: 543  VLSPNP 560
            VL+P+P
Sbjct: 1356 VLAPDP 1361


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  140 bits (353), Expect = 2e-31
 Identities = 71/171 (41%), Positives = 108/171 (63%)
 Frame = +3

Query: 3   PFFQLLKRPKKKQINWTPEYEYTFQALKDHLQQLPVLFAPVPGDTLFFYLAVIYYTVSSV 182
           PFFQLL+    K   W  E    F A+K+HL++LP +  P  G+ L  Y++    TV++V
Sbjct: 23  PFFQLLRG--NKTFTWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAV 80

Query: 183 LLHEDVSIQKPIYNVSKVLQGLELNYLMLEKFTLSLIHTSRRLFPYFQAHSVMVLTNHPL 362
           LL E +  Q PIY VS VL   E  Y +LEK +L+++  +R+L PYF AH++ VL+NHPL
Sbjct: 81  LLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPL 140

Query: 363 KGILNRSEISG*LTKWTIELGQYNLLFQPRSVIKGQVLTNFIIEISHLEHQ 515
           +  L + + SG L +W +EL ++ + ++PR+ IK Q L +FI+E S+ E +
Sbjct: 141 EKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEE 191


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  140 bits (353), Expect = 2e-31
 Identities = 71/171 (41%), Positives = 108/171 (63%)
 Frame = +3

Query: 3   PFFQLLKRPKKKQINWTPEYEYTFQALKDHLQQLPVLFAPVPGDTLFFYLAVIYYTVSSV 182
           PFFQLL+    K   W  E    F A+K+HL++LP +  P  G+ L  Y++    TV++V
Sbjct: 23  PFFQLLRG--NKTFKWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAV 80

Query: 183 LLHEDVSIQKPIYNVSKVLQGLELNYLMLEKFTLSLIHTSRRLFPYFQAHSVMVLTNHPL 362
           LL E +  Q PIY VS VL   E  Y +LEK +L+++  +R+L PYF AH++ VL+NHPL
Sbjct: 81  LLVERIKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPL 140

Query: 363 KGILNRSEISG*LTKWTIELGQYNLLFQPRSVIKGQVLTNFIIEISHLEHQ 515
           +  L + + SG L +W +EL ++ + ++PR+ IK Q L +FI+E S+ E +
Sbjct: 141 EKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEE 191


>gb|AAL31077.1|AC091749_6 putative polyprotein [Oryza sativa Japonica Group]
            gi|22655740|gb|AAN04157.1| Putative polyprotein [Oryza
            sativa Japonica Group] gi|31431207|gb|AAP53022.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1265

 Score =  138 bits (348), Expect = 8e-31
 Identities = 78/186 (41%), Positives = 106/186 (56%)
 Frame = +3

Query: 3    PFFQLLKRPKKKQINWTPEYEYTFQALKDHLQQLPVLFAPVPGDTLFFYLAVIYYTVSSV 182
            PFF+ L+   K   NWTPE +  F  LK +LQ  P L +P PG  L  YLA     VS+ 
Sbjct: 518  PFFKTLRGAGK--FNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASPVAVSAA 575

Query: 183  LLHEDVSIQKPIYNVSKVLQGLELNYLMLEKFTLSLIHTSRRLFPYFQAHSVMVLTNHPL 362
            L+ E    QKP+Y VS+ LQG +  Y+ +EK   +L+  SR+L  YFQAH V+V + +PL
Sbjct: 576  LVQETKFGQKPVYFVSEALQGAKTRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQYPL 635

Query: 363  KGILNRSEISG*LTKWTIELGQYNLLFQPRSVIKGQVLTNFIIEISHLEHQVEHPAIQIP 542
              IL   E++G L+KW  EL  ++L F  RS IK QVL +F+ E +             P
Sbjct: 636  GEILRGKEVTGRLSKWAAELSPFDLHFVARSAIKSQVLADFVAEWT-------------P 682

Query: 543  VLSPNP 560
            VL+P+P
Sbjct: 683  VLAPDP 688


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