BLASTX nr result

ID: Cephaelis21_contig00050457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050457
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   130   1e-28
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   124   1e-26
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             123   1e-26
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             123   1e-26
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             123   1e-26

>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/135 (44%), Positives = 92/135 (68%)
 Frame = -1

Query: 405 ELGTYLGVPLLHKRVTKATYQFIVDWVNQKLDGWAARQLSFAGRITLAKAVLLAIPSYFM 226
           ELG YLG+P+L KR+ K T+  +++ V+ +L GW +R LS AGRITL KAVL++IP + M
Sbjct: 544 ELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTM 603

Query: 225 QTSAIPMGTCKQIEKVVRNFIWGGDKEKRRMALAKWETCCQPFDRGGLGVRNMRNQNKSL 46
            +  +P    +Q++KV RNF+WG   EKR+  L  W+  C+P   GGLG+R  ++ N++L
Sbjct: 604 SSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRAL 663

Query: 45  LMKIGVQLVTKRDAL 1
           L K+G +L+  + +L
Sbjct: 664 LAKVGWRLLNDKVSL 678


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/135 (41%), Positives = 88/135 (65%)
 Frame = -1

Query: 405  ELGTYLGVPLLHKRVTKATYQFIVDWVNQKLDGWAARQLSFAGRITLAKAVLLAIPSYFM 226
            ELG YLG+P+L KR+ K T+  +++ V+ +L GW  R LS AGRITL KAVL +IP + M
Sbjct: 609  ELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVM 668

Query: 225  QTSAIPMGTCKQIEKVVRNFIWGGDKEKRRMALAKWETCCQPFDRGGLGVRNMRNQNKSL 46
                +P+ T   +++  R F+WG   EK++  L  W   C+P   GG+G+R+ R+ NK+L
Sbjct: 669  SAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKAL 728

Query: 45   LMKIGVQLVTKRDAL 1
            + K+G +L+  +++L
Sbjct: 729  VAKVGWRLLQDKESL 743


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/134 (41%), Positives = 84/134 (62%)
 Frame = -1

Query: 402  LGTYLGVPLLHKRVTKATYQFIVDWVNQKLDGWAARQLSFAGRITLAKAVLLAIPSYFMQ 223
            LGTYLG+P+L +RV++ T+  ++D +  KL  W A  L+ AGR  L +A L  +P+Y MQ
Sbjct: 1283 LGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQ 1342

Query: 222  TSAIPMGTCKQIEKVVRNFIWGGDKEKRRMALAKWETCCQPFDRGGLGVRNMRNQNKSLL 43
              A+P+ TC +I+K  RNF+WG D   R++    W   C+P + GGLG+R  R+ N++ L
Sbjct: 1343 VMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFL 1402

Query: 42   MKIGVQLVTKRDAL 1
             K+  Q+ +  D L
Sbjct: 1403 TKMAWQIFSNIDKL 1416


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/134 (41%), Positives = 84/134 (62%)
 Frame = -1

Query: 402  LGTYLGVPLLHKRVTKATYQFIVDWVNQKLDGWAARQLSFAGRITLAKAVLLAIPSYFMQ 223
            LGTYLG+P+L +RV++ T+  ++D +  KL  W A  L+ AGR  L +A L  +P+Y MQ
Sbjct: 751  LGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQ 810

Query: 222  TSAIPMGTCKQIEKVVRNFIWGGDKEKRRMALAKWETCCQPFDRGGLGVRNMRNQNKSLL 43
              A+P+ TC +I+K  RNF+WG D   R++    W   C+P + GGLG+R  R+ N++ L
Sbjct: 811  VMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFL 870

Query: 42   MKIGVQLVTKRDAL 1
             K+  Q+ +  D L
Sbjct: 871  TKMAWQIFSNIDKL 884


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/134 (41%), Positives = 84/134 (62%)
 Frame = -1

Query: 402  LGTYLGVPLLHKRVTKATYQFIVDWVNQKLDGWAARQLSFAGRITLAKAVLLAIPSYFMQ 223
            LGTYLG+P+L +RV++ T+  ++D +  KL  W A  L+ AGR  L +A L  +P+Y MQ
Sbjct: 751  LGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQ 810

Query: 222  TSAIPMGTCKQIEKVVRNFIWGGDKEKRRMALAKWETCCQPFDRGGLGVRNMRNQNKSLL 43
              A+P+ TC +I+K  RNF+WG D   R++    W   C+P + GGLG+R  R+ N++ L
Sbjct: 811  VMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFL 870

Query: 42   MKIGVQLVTKRDAL 1
             K+  Q+ +  D L
Sbjct: 871  TKMAWQIFSNIDKL 884


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