BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050421
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   100   2e-22
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     93   5e-20
emb|CAN78818.1| hypothetical protein VITISV_015505 [Vitis vinifera]    80   1e-17
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]    70   2e-10
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          62   1e-09

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  100 bits (250), Expect(2) = 2e-22
 Identities = 48/90 (53%), Positives = 62/90 (68%)
 Frame = -1

Query: 270 AAPVLYKIQVTVCTDQLNAVEDVASPNLRHRRLAHVSKKRLNVLTKKSLILLAKGKYLNP 91
           A   LY+    +C  +LNA +D  S +L H+R+ H+S+K L +L KKSLI  AKG  + P
Sbjct: 397 ARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP 456

Query: 90  CDYCLFGKQHRISFQKDSKRFENKLELVYS 1
           CDYCLFGKQHR+SFQ  S+R  N L+LVYS
Sbjct: 457 CDYCLFGKQHRVSFQTSSERKLNILDLVYS 486



 Score = 30.0 bits (66), Expect(2) = 2e-22
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 349 EGYEHYIGNDN*KLTKDSLVVTRG 278
           +GYE Y  N   +LTK SLV+ +G
Sbjct: 372 DGYESYFANQKWRLTKGSLVIAKG 395


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 92.8 bits (229), Expect(2) = 5e-20
 Identities = 44/90 (48%), Positives = 59/90 (65%)
 Frame = -1

Query: 270 AAPVLYKIQVTVCTDQLNAVEDVASPNLRHRRLAHVSKKRLNVLTKKSLILLAKGKYLNP 91
           A   LY+    +C  +LNA  +  S +L H+R+ H S+K L +L+KKSLI   KG  + P
Sbjct: 398 ARGTLYRTNAEICQGELNAAHEENSADLWHKRMGHTSEKGLQILSKKSLISFTKGTTIKP 457

Query: 90  CDYCLFGKQHRISFQKDSKRFENKLELVYS 1
           C+Y LFGKQHR+SFQ  S+R  N L+LVYS
Sbjct: 458 CNYWLFGKQHRVSFQTSSERKSNILDLVYS 487



 Score = 29.6 bits (65), Expect(2) = 5e-20
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 349 EGYEHYIGNDN*KLTKDSLVVTRG 278
           +GYE+Y  N   +LTK +LV+ +G
Sbjct: 373 DGYENYFANQKWRLTKGALVIAKG 396


>emb|CAN78818.1| hypothetical protein VITISV_015505 [Vitis vinifera]
          Length = 339

 Score = 80.1 bits (196), Expect(2) = 1e-17
 Identities = 44/86 (51%), Positives = 57/86 (66%)
 Frame = -1

Query: 258 LYKIQVTVCTDQLNAVEDVASPNLRHRRLAHVSKKRLNVLTKKSLILLAKGKYLNPCDYC 79
           LYK Q  VC ++L+A +   S  L H+RL H+ +KRL VL +KSLI LA  + L+ CD+C
Sbjct: 105 LYKTQGKVCNNELHATKGT-SLELWHKRLGHMREKRLQVLARKSLIPLAINESLSYCDHC 163

Query: 78  LFGKQHRISFQKDSKRFENKLELVYS 1
           L  KQHR+SF   SK+   K ELVYS
Sbjct: 164 LVRKQHRVSFSSRSKKKLKKSELVYS 189



 Score = 34.3 bits (77), Expect(2) = 1e-17
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -3

Query: 349 EGYEHYIGNDN*KLTKDSLVVTRGKLCCS 263
           +GYE++      KLTK SLVV +G+ CC+
Sbjct: 76  QGYENHFDKGKWKLTKGSLVVAKGESCCT 104


>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
          Length = 776

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -1

Query: 258 LYKIQVTVCTDQLNAVEDVASPNLRHRRLAHVSKKRLNVLTKKSLILLAKGKYLNPCDYC 79
           LYK +  +   ++N VE+ AS  L H+RL+H+S+K L VLT+K  + + KG  L PC +C
Sbjct: 465 LYKTKARLVKGEVNIVENEASTELWHKRLSHISEKGLQVLTRKKFLPI-KGTSLLPCTHC 523

Query: 78  LFGKQHRISFQK-DSKRFENKLELVY 4
           L GKQ R++F K  S+R  + L+LV+
Sbjct: 524 LSGKQSRVAFHKFPSRRKPDILDLVH 549


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 61.6 bits (148), Expect(2) = 1e-09
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = -1

Query: 258 LYKIQVTVCTDQLNAVEDVASPNLRHRRLAHVSKKRLNVLTKKSLILLAKGKYLNPCDYC 79
           LY +Q +V  D +N VE   +  L H+RL H+S K ++ L KKS +   K   L+ C +C
Sbjct: 396 LYSLQSSVSDDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDKCVHC 455

Query: 78  LFGKQHRISFQK-DSKRFENKLELVYS 1
           L GKQ R+SF      R    L+L++S
Sbjct: 456 LAGKQRRVSFMSHPPTRKSEPLDLIHS 482



 Score = 25.4 bits (54), Expect(2) = 1e-09
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 352 NEGYEHYIGNDN*KLTKDSLVVTRG 278
           ++G+  + G+ + K+TK SLVV RG
Sbjct: 366 DDGFCCFFGDGHWKITKGSLVVARG 390