BLASTX nr result

ID: Cephaelis21_contig00050352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050352
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
emb|CBI24389.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_003596227.1| Pentatricopeptide repeat-containing protein,...    83   3e-14
gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich p...    75   4e-12

>ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial [Vitis vinifera]
          Length = 744

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +2

Query: 158 TKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YRNGQLEKARKLFD 337
           T  FLVHC+SQITKHGR G++ EAESIF+ M  KN +S+TAMLT  Y NG + KARK+F+
Sbjct: 106 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 165

Query: 338 EMPQ 349
           +MPQ
Sbjct: 166 KMPQ 169


>emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = +2

Query: 158 TKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YRNGQLEKARKLFD 337
           T  FLVHC+SQITKHGR G++ EAESIF+ M  KN +S+TAMLT  Y NG + KARK+F+
Sbjct: 27  TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 86

Query: 338 EMPQ 349
           +MPQ
Sbjct: 87  KMPQ 90


>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Glycine max]
          Length = 713

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
 Frame = +2

Query: 86  HKPNRKIFLSSAFATQAALN--FNTGTK--TFLVHCNSQITKHGRAGNINEAESIFNDMS 253
           HK   K+ L  +   Q+  N   N+G K   FL+ CN+QI ++GR GN+ EAESIF+ M 
Sbjct: 9   HKRITKLNLFQSKLNQSHNNDSINSGGKGSKFLIQCNTQIAENGRNGNVKEAESIFHKMP 68

Query: 254 TKNIVSYTAMLTE*YRNGQLEKARKLFDEMPQ 349
            KN  S+TAMLT   +NGQ++ AR+LFDEMPQ
Sbjct: 69  IKNTASWTAMLTAFAQNGQIQNARRLFDEMPQ 100


>ref|XP_003596227.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355485275|gb|AES66478.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 402

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = +2

Query: 128 TQAALNFNTGTKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YRNG 307
           TQ   N   G+K F+  CN +I+++GR GN+N AE+IFN MS KNIV++TAMLT   +NG
Sbjct: 17  TQNQTNIAKGSK-FITECNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNG 75

Query: 308 QLEKARKLFDEMPQ 349
           Q+  ARKLFDEMP+
Sbjct: 76  QITTARKLFDEMPE 89


>gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
           gb|AF151215 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana]
          Length = 816

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
 Frame = +2

Query: 128 TQAALNF--NTGTKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YR 301
           TQ   NF   T T T +  CNSQI+KH R GN+ EAE+IF  MS ++IVS+ AM++    
Sbjct: 34  TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93

Query: 302 NGQLEKARKLFDEMP 346
           NG++ KA ++FDEMP
Sbjct: 94  NGKMSKAWQVFDEMP 108


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