BLASTX nr result
ID: Cephaelis21_contig00050352
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00050352 (351 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi... 88 6e-16 emb|CBI24389.3| unnamed protein product [Vitis vinifera] 88 6e-16 ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi... 83 2e-14 ref|XP_003596227.1| Pentatricopeptide repeat-containing protein,... 83 3e-14 gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich p... 75 4e-12 >ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Vitis vinifera] Length = 744 Score = 88.2 bits (217), Expect = 6e-16 Identities = 41/64 (64%), Positives = 51/64 (79%) Frame = +2 Query: 158 TKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YRNGQLEKARKLFD 337 T FLVHC+SQITKHGR G++ EAESIF+ M KN +S+TAMLT Y NG + KARK+F+ Sbjct: 106 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 165 Query: 338 EMPQ 349 +MPQ Sbjct: 166 KMPQ 169 >emb|CBI24389.3| unnamed protein product [Vitis vinifera] Length = 665 Score = 88.2 bits (217), Expect = 6e-16 Identities = 41/64 (64%), Positives = 51/64 (79%) Frame = +2 Query: 158 TKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YRNGQLEKARKLFD 337 T FLVHC+SQITKHGR G++ EAESIF+ M KN +S+TAMLT Y NG + KARK+F+ Sbjct: 27 TTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFE 86 Query: 338 EMPQ 349 +MPQ Sbjct: 87 KMPQ 90 >ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600, mitochondrial-like [Glycine max] Length = 713 Score = 83.2 bits (204), Expect = 2e-14 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 4/92 (4%) Frame = +2 Query: 86 HKPNRKIFLSSAFATQAALN--FNTGTK--TFLVHCNSQITKHGRAGNINEAESIFNDMS 253 HK K+ L + Q+ N N+G K FL+ CN+QI ++GR GN+ EAESIF+ M Sbjct: 9 HKRITKLNLFQSKLNQSHNNDSINSGGKGSKFLIQCNTQIAENGRNGNVKEAESIFHKMP 68 Query: 254 TKNIVSYTAMLTE*YRNGQLEKARKLFDEMPQ 349 KN S+TAMLT +NGQ++ AR+LFDEMPQ Sbjct: 69 IKNTASWTAMLTAFAQNGQIQNARRLFDEMPQ 100 >ref|XP_003596227.1| Pentatricopeptide repeat-containing protein, partial [Medicago truncatula] gi|355485275|gb|AES66478.1| Pentatricopeptide repeat-containing protein, partial [Medicago truncatula] Length = 402 Score = 82.8 bits (203), Expect = 3e-14 Identities = 42/74 (56%), Positives = 55/74 (74%) Frame = +2 Query: 128 TQAALNFNTGTKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YRNG 307 TQ N G+K F+ CN +I+++GR GN+N AE+IFN MS KNIV++TAMLT +NG Sbjct: 17 TQNQTNIAKGSK-FITECNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNG 75 Query: 308 QLEKARKLFDEMPQ 349 Q+ ARKLFDEMP+ Sbjct: 76 QITTARKLFDEMPE 89 >gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca gb|AF151215 and contains multiple PPR PF|01535 repeats [Arabidopsis thaliana] Length = 816 Score = 75.5 bits (184), Expect = 4e-12 Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%) Frame = +2 Query: 128 TQAALNF--NTGTKTFLVHCNSQITKHGRAGNINEAESIFNDMSTKNIVSYTAMLTE*YR 301 TQ NF T T T + CNSQI+KH R GN+ EAE+IF MS ++IVS+ AM++ Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93 Query: 302 NGQLEKARKLFDEMP 346 NG++ KA ++FDEMP Sbjct: 94 NGKMSKAWQVFDEMP 108