BLASTX nr result

ID: Cephaelis21_contig00050348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050348
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   143   1e-32
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   135   3e-30
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   135   4e-30
emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabido...   135   4e-30

>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/92 (77%), Positives = 79/92 (85%)
 Frame = +3

Query: 3   GMDVEEVKSVINYDMPPYIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKAGNH 182
           GMDVE VK+VINYDMP +IKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKA N 
Sbjct: 399 GMDVEGVKNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADND 458

Query: 183 SCPLYHILPESLESLRSIYTLALEKLKESVES 278
           SCP++++   S+E L+  Y  ALEKLKE VES
Sbjct: 459 SCPVHNLPSSSIEFLQPTYVSALEKLKEKVES 490


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/92 (70%), Positives = 79/92 (85%)
 Frame = +3

Query: 3   GMDVEEVKSVINYDMPPYIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKAGNH 182
           GMDVE V++VINYD+P +IKTYIHRAGRTARAGQ+GRCFTLLRKDE KRFK+LLQKA + 
Sbjct: 399 GMDVEGVRNVINYDVPKFIKTYIHRAGRTARAGQTGRCFTLLRKDEDKRFKQLLQKADSD 458

Query: 183 SCPLYHILPESLESLRSIYTLALEKLKESVES 278
           SCP++ +   S+E+L S+Y  ALEKLKE+V S
Sbjct: 459 SCPVHSVASNSIEALHSVYVSALEKLKETVVS 490


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/92 (69%), Positives = 76/92 (82%)
 Frame = +3

Query: 3   GMDVEEVKSVINYDMPPYIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKAGNH 182
           GMD+E V+++INYDMP Y+KTY+HRAGRTARAGQ+GRC TLLR  EVKRFKKLLQKA N 
Sbjct: 402 GMDIEGVRNIINYDMPAYVKTYVHRAGRTARAGQTGRCITLLRTHEVKRFKKLLQKADND 461

Query: 183 SCPLYHILPESLESLRSIYTLALEKLKESVES 278
           SCP+Y I   S++SL   Y  ALEKLKE+V+S
Sbjct: 462 SCPIYSIPSSSVKSLHPFYLSALEKLKETVQS 493


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/92 (70%), Positives = 77/92 (83%)
 Frame = +3

Query: 3   GMDVEEVKSVINYDMPPYIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKAGNH 182
           GMDV+ V +VINYDMPP+ KT+IHRAGRTARAGQ+GRCFTLL   EV+RF KLL+K G+ 
Sbjct: 401 GMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSD 460

Query: 183 SCPLYHILPESLESLRSIYTLALEKLKESVES 278
           SCP+Y I P SL+S+R+ YT ALEKLKE VES
Sbjct: 461 SCPIYPIPPTSLDSIRATYTPALEKLKELVES 492


>emb|CAB45993.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana]
           gi|7268333|emb|CAB78627.1| ATP-dependent RNA helicase
           like protein [Arabidopsis thaliana]
          Length = 474

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/92 (70%), Positives = 77/92 (83%)
 Frame = +3

Query: 3   GMDVEEVKSVINYDMPPYIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKAGNH 182
           GMDV+ V +VINYDMPP+ KT+IHRAGRTARAGQ+GRCFTLL   EV+RF KLL+K G+ 
Sbjct: 353 GMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSD 412

Query: 183 SCPLYHILPESLESLRSIYTLALEKLKESVES 278
           SCP+Y I P SL+S+R+ YT ALEKLKE VES
Sbjct: 413 SCPIYPIPPTSLDSIRATYTPALEKLKELVES 444


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