BLASTX nr result

ID: Cephaelis21_contig00050341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050341
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   105   4e-21
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/69 (69%), Positives = 61/69 (88%)
 Frame = +3

Query: 3   LFNEMLCKDSNSHPDLLTYNILLTALCKQDRITRAIDLLNNMLDRGCDPDIVTCNIFLTT 182
           LFNEMLC++S+S PD++TYNILL ALCKQ+ I+ AIDLLN+MLDRGC+PD++TCNIFL  
Sbjct: 509 LFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 568

Query: 183 LKDKTNPSQ 209
           L++K NP Q
Sbjct: 569 LREKLNPPQ 577


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/69 (69%), Positives = 61/69 (88%)
 Frame = +3

Query: 3   LFNEMLCKDSNSHPDLLTYNILLTALCKQDRITRAIDLLNNMLDRGCDPDIVTCNIFLTT 182
           LFNEMLC++S+S PD++TYNILL ALCKQ+ I+ AIDLLN+MLDRGC+PD++TCNIFL  
Sbjct: 525 LFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 584

Query: 183 LKDKTNPSQ 209
           L++K NP Q
Sbjct: 585 LREKLNPPQ 593


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/69 (69%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   LFNEMLCKDSNSHPDLLTYNILLTALCKQDRITRAIDLLNNMLDRGCDPDIVTCNIFLTT 182
           L+NEMLC++ +S PD++TYNILL ALCKQ  I+RAIDLLN+MLDRGCDPD+VTC IFL T
Sbjct: 506 LYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRT 565

Query: 183 LKDKTNPSQ 209
           L++K +P Q
Sbjct: 566 LREKLDPPQ 574


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/69 (66%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   LFNEMLCKDSNSHPDLLTYNILLTALCKQDRITRAIDLLNNMLDRGCDPDIVTCNIFLTT 182
           L+NEMLC + +S PD++TYNIL  ALCKQ  I+RA+DLLN+MLDRGCDPD+VTCNIFL  
Sbjct: 518 LYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRM 577

Query: 183 LKDKTNPSQ 209
           L++K +P Q
Sbjct: 578 LREKLDPPQ 586


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/69 (66%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   LFNEMLCKDSNSHPDLLTYNILLTALCKQDRITRAIDLLNNMLDRGCDPDIVTCNIFLTT 182
           L+NEMLC+  +S PD++TYNILL  LCKQ  I+RAIDLLN+MLDRGCDPD+VTC IFL  
Sbjct: 536 LYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRM 595

Query: 183 LKDKTNPSQ 209
           L++K +P Q
Sbjct: 596 LREKLDPPQ 604


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