BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050273
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi...    52   1e-08
ref|NP_175671.1| pentatricopeptide repeat-containing protein [Ar...    54   4e-08
ref|XP_003597874.1| Pentatricopeptide repeat-containing protein ...    57   2e-06
ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06
emb|CBI36298.3| unnamed protein product [Vitis vinifera]               55   4e-06

>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
           gi|449484425|ref|XP_004156880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score = 51.6 bits (122), Expect(2) = 1e-08
 Identities = 21/33 (63%), Positives = 29/33 (87%)
 Frame = +3

Query: 33  YCKKGGVKRAYLLFTELKLKGFLPTLETYGAMV 131
           YCKKG V+ AY LF +LK+KGF+PTL+T+G++V
Sbjct: 253 YCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLV 285



 Score = 32.3 bits (72), Expect(2) = 1e-08
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
 Frame = +2

Query: 152 GALRTGFCKKWM----------QGG*HLTVNVCSHNNILDAKFRHGSVEEAVGTVREIEG 301
           G+L  GFCK  M               L+VNV  +NNI+DA+++ G   +A  T++E+  
Sbjct: 282 GSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSE 341

Query: 302 *C 307
            C
Sbjct: 342 NC 343


>ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g52620 gi|5903044|gb|AAD55603.1|AC008016_13 Contains
           3 PF|01535 DUF domains [Arabidopsis thaliana]
           gi|332194709|gb|AEE32830.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score = 54.3 bits (129), Expect(2) = 4e-08
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +3

Query: 33  YCKKGGVKRAYLLFTELKLKGFLPTLETYGAMV 131
           YCK G ++ AYL+F ELKLKGF+PTLET+G M+
Sbjct: 250 YCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282



 Score = 27.7 bits (60), Expect(2) = 4e-08
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 203 LTVNVCSHNNILDAKFRHG 259
           L V+V   NNI+DAK+RHG
Sbjct: 306 LRVSVWFLNNIIDAKYRHG 324


>ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359582|gb|ABD28711.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355486922|gb|AES68125.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 822

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +3

Query: 33  YCKKGGVKRAYLLFTELKLKGFLPTLETYGAMV 131
           YCKKG +KRA  +F ELKLKGFLPTLETYGA++
Sbjct: 250 YCKKGDLKRATRVFEELKLKGFLPTLETYGALI 282


>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
 Frame = +1

Query: 1   PNMAFYNTLIDIVRKVVSKELTYSSR-S*N*RDFCPRWRHMGQWLNAFCKEGGFE--NRL 171
           PN+ FYNTLID   K    E+          + F P     G  +N FCK+G F+  +RL
Sbjct: 237 PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRL 296

Query: 172 LQEVDARGLTLDS*CMQS-------QQHFRCEV*T------W*CRGS--------SGDCE 288
           L E+++RGLT++     +         H    V T        C+          SG C 
Sbjct: 297 LMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCR 356

Query: 289 RD*GMM*F*LLQQARNREVPVNKFSYT-LIHIHCREGNFDRA 411
                    LL+QA  + +  NKFSYT LIH +C++G +DRA
Sbjct: 357 DGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 398


>emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
 Frame = +1

Query: 1   PNMAFYNTLIDIVRKVVSKELTYSSR-S*N*RDFCPRWRHMGQWLNAFCKEGGFE--NRL 171
           PN+ FYNTLID   K    E+          + F P     G  +N FCK+G F+  +RL
Sbjct: 218 PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRL 277

Query: 172 LQEVDARGLTLDS*CMQS-------QQHFRCEV*T------W*CRGS--------SGDCE 288
           L E+++RGLT++     +         H    V T        C+          SG C 
Sbjct: 278 LMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCR 337

Query: 289 RD*GMM*F*LLQQARNREVPVNKFSYT-LIHIHCREGNFDRA 411
                    LL+QA  + +  NKFSYT LIH +C++G +DRA
Sbjct: 338 DGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 379