BLASTX nr result

ID: Cephaelis21_contig00050252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050252
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ...    67   1e-09
ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    67   2e-09
ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ...    66   3e-09
ref|NP_974953.1| cyclic nucleotide gated channel [Arabidopsis th...    65   7e-09

>ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 732

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
 Frame = +3

Query: 3   AWRRYSRRKHXXXXXXXXXXXXXXXX-TYNAPAYSIGATMYASRFAANALRGIHRNRSTR 179
           AWRRYS+RK                    +  +YS+GAT  ASRFAANALRG+HRNR  +
Sbjct: 651 AWRRYSKRKTMELSQKDEPEESEGTRGNASGSSYSLGATFLASRFAANALRGVHRNREAK 710

Query: 180 ----LIKPAKPAEPDFEADLMD 233
               L+K  KP EPDF AD  D
Sbjct: 711 SARELVKLQKPPEPDFTADDAD 732


>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
 Frame = +3

Query: 3   AWRRYSRRKHXXXXXXXXXXXXXXXXTY-NAPAYSIGATMYASRFAANALRGIHRNRSTR 179
           AWRRYS+RK+                +     +YSIGAT  A+RFAANALRG+HRNR+ +
Sbjct: 654 AWRRYSKRKNMELRRKEEEDEVDETRSNAGGGSYSIGATFLATRFAANALRGVHRNRNAK 713

Query: 180 ----LIKPAKPAEPDFEADLMD 233
               L+K  KP EPDF A+  D
Sbjct: 714 TARELVKLQKPPEPDFSAEDAD 735


>ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|222866563|gb|EEF03694.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
 Frame = +3

Query: 3   AWRRYSRRKHXXXXXXXXXXXXXXXXTYN----APAYSIGATMYASRFAANALRGIHRNR 170
           AWRRYS+RK                   +      +YSIGAT  A+RFAANALRGIHRNR
Sbjct: 649 AWRRYSKRKSLELRRKEEEDEAEADGNRSNMRGGGSYSIGATFLATRFAANALRGIHRNR 708

Query: 171 STR----LIKPAKPAEPDFEADLMD 233
           + +    L+K  KP EPDF AD  D
Sbjct: 709 NAKTARELVKLQKPPEPDFTADDAD 733


>ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5 [Vitis
           vinifera] gi|297743648|emb|CBI36531.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
 Frame = +3

Query: 3   AWRRYSRRK-----------HXXXXXXXXXXXXXXXXTYNAPAYSIGATMYASRFAANAL 149
           AWRRYS+RK                                 +YS+GAT+ ASRFAANAL
Sbjct: 652 AWRRYSKRKILELRRKEEEEEEAAAAAAAEGLSGTNNNVRGGSYSLGATILASRFAANAL 711

Query: 150 RGIHRNRSTR----LIKPAKPAEPDFEADLMD 233
           RG+HRNR T+    L+K  KP EPDF AD  D
Sbjct: 712 RGVHRNRITKSARELVKLQKPPEPDFSADDAD 743


>ref|NP_974953.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|4581205|emb|CAB40130.1| cyclic nucleotide and
           calmodulin-regulated ion channel [Arabidopsis thaliana]
           gi|9758363|dbj|BAB08864.1| cyclic nucleotide and
           calmodulin-regulated ion channel [Arabidopsis thaliana]
           gi|332009592|gb|AED96975.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
          Length = 710

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +3

Query: 3   AWRRYSRRKHXXXXXXXXXXXXXXXXTYNAPAYSIGATMYASRFAANALRGIHRNRSTR- 179
           AWRRY +RK                     P+YSIGA   A++FAANALR IHRNR+T+ 
Sbjct: 637 AWRRYCKRKKMEEAEAEAAAVSSSTA---GPSYSIGAAFLATKFAANALRTIHRNRNTKI 693

Query: 180 --LIKPAKPAEPDFEAD 224
             L+K  KP EPDF AD
Sbjct: 694 RDLVKLQKPPEPDFTAD 710


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