BLASTX nr result

ID: Cephaelis21_contig00050217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050217
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   165   7e-39
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              157   2e-36
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   134   1e-29
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   129   4e-28
ref|XP_003588560.1| DNA polymerase I family protein expressed [M...   120   3e-25

>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  165 bits (417), Expect = 7e-39
 Identities = 77/155 (49%), Positives = 107/155 (69%), Gaps = 2/155 (1%)
 Frame = +3

Query: 171  LSCQVTSITNATNGYDDKLDHVWRQQHQIDAQCNDSQDRAWEKGPLNASNAPGGFDTFLE 350
            LS +  +  N     D  +DH   +Q + + +C D+  +A+EKGP++A+N PGGFD+FL+
Sbjct: 1440 LSIKSMNTGNGNGTSDAYVDHGQHEQQRGENECLDNNGKAYEKGPIHATNTPGGFDSFLD 1499

Query: 351  LWDNTAEFDLDVHFNKRSEINSAASFEIQGIAVCWERSPVYYVNLPKDLFLSSGRKIDSV 530
            LWD+  EF  D+HFNK+SE+NS A +EI GIA+CWE SPVYY+NLPKDL  S  RK   +
Sbjct: 1500 LWDSVREFYFDIHFNKQSEVNSLAPYEIHGIAICWENSPVYYINLPKDLLCSDERKNIYL 1559

Query: 531  PSNVSGDNENVL--SHQLELAKSRWRRIGTILGKE 629
              NVS D  N+L  +H+LE AK RW ++G I+GK+
Sbjct: 1560 TMNVSDDKPNILDANHRLEAAKWRWSKVGKIMGKK 1594


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  157 bits (396), Expect = 2e-36
 Identities = 70/124 (56%), Positives = 94/124 (75%), Gaps = 2/124 (1%)
 Frame = +3

Query: 264  QCNDSQDRAWEKGPLNASNAPGGFDTFLELWDNTAEFDLDVHFNKRSEINSAASFEIQGI 443
            +C D+  +A+EKGP++A+N PGGFD+FL+LWD+  EF  D+HFNK+SE+NS A +EI GI
Sbjct: 1367 ECLDNNGKAYEKGPIHATNTPGGFDSFLDLWDSVREFYFDIHFNKQSEVNSLAPYEIHGI 1426

Query: 444  AVCWERSPVYYVNLPKDLFLSSGRKIDSVPSNVSGDNENVL--SHQLELAKSRWRRIGTI 617
            A+CWE SPVYY+NLPKDL  S  RK   +  NVS D  N+L  +H+LE AK RW ++G I
Sbjct: 1427 AICWENSPVYYINLPKDLLCSDERKNIYLTMNVSDDKPNILDANHRLEAAKWRWSKVGKI 1486

Query: 618  LGKE 629
            +GK+
Sbjct: 1487 MGKK 1490


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  134 bits (337), Expect = 1e-29
 Identities = 76/201 (37%), Positives = 106/201 (52%)
 Frame = +3

Query: 24   IETSERVNSAAAKEIETVSGKTILLEEGSNAHFHKIMSTSNYTNGANTSLSCQVTSITNA 203
            I+T + V  A+A+   T   ++ +  E S     K + T N+   A   LS +     + 
Sbjct: 1371 IKTIDVVLEASAETNSTGLVQSNIGAENSKVVDRKSLPTGNHNANAVVVLSVESEQDGDG 1430

Query: 204  TNGYDDKLDHVWRQQHQIDAQCNDSQDRAWEKGPLNASNAPGGFDTFLELWDNTAEFDLD 383
            T  +   +     +Q       +D+ + A EKGP+ ASN  GG D+FL LWD   EF  D
Sbjct: 1431 TGTHQRNILREVHEQCSRQNLSSDNMENACEKGPIKASNISGGLDSFLVLWDAAQEFYFD 1490

Query: 384  VHFNKRSEINSAASFEIQGIAVCWERSPVYYVNLPKDLFLSSGRKIDSVPSNVSGDNENV 563
            +H+NKRSE+NS A +EI G+A+CWE SP+YYVNLPKDL     +K    P N        
Sbjct: 1491 LHYNKRSEVNSVAPYEIHGMAICWENSPIYYVNLPKDLLCPDNQKYVLRPEN-------- 1542

Query: 564  LSHQLELAKSRWRRIGTILGK 626
                LE+ + RW RIG I+GK
Sbjct: 1543 ---WLEIVRHRWNRIGKIMGK 1560


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
 Frame = +3

Query: 138  TSNYTNGAN-TSLSCQVTSITNATNGYDDKLDHVWRQQHQIDAQCNDSQDRAWEKGPLNA 314
            TS++T  A+ T LS Q+    + +  +D    H   + H+     + +   + +KGP+NA
Sbjct: 1382 TSDHTKNADMTILSVQLQKPNDKSGVHDGCDAHCTEEAHKNGNLASGNAGSSSQKGPINA 1441

Query: 315  SNAPGGFDTFLELWDNTAEFDLDVHFNKRSEINSAASFEIQGIAVCWERSPVYYVNLPKD 494
             ++PGG D+FL+LWD+  EF  D+H+ KR E++S A FEI GIAVCWE S VYY+NLP+D
Sbjct: 1442 VSSPGGLDSFLDLWDSMPEFYFDIHYIKRLELHSTAPFEIHGIAVCWENSSVYYINLPRD 1501

Query: 495  LFLSSGRKIDSVPSNVSGDNENVLS----HQLELAKSRWRRIGTILGK 626
            + LS   K   +  +     + V S      LE+A+SRW RI  I+GK
Sbjct: 1502 ILLSDSIKDGCLSLSACSHKKKVSSSNSKQDLEIARSRWNRISKIIGK 1549


>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
            gi|355477608|gb|AES58811.1| DNA polymerase I family
            protein expressed [Medicago truncatula]
          Length = 2269

 Score =  120 bits (300), Expect = 3e-25
 Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
 Frame = +3

Query: 297  KGPLNASNAPGGFDTFLELWDNTAEFDLDVHFNKRSEINSAASFEIQGIAVCWERSPVYY 476
            KGP+NA ++PGG D+FL+LWD  AEF  D+H+ KR E++SAA FE+ GIA+CWE SP+YY
Sbjct: 1514 KGPINAVSSPGGLDSFLDLWDTVAEFYFDIHYIKRLELHSAAPFEVHGIAICWENSPMYY 1573

Query: 477  VNLPKDLFLSSGRKIDSVPSNVSGDNENVLS----HQLELAKSRWRRIGTILGKE 629
            +NLP+D+ LS  RK D          + V S      L  A  RW RI  I+ K+
Sbjct: 1574 INLPRDILLSGNRKDDGFSLTACSSKQKVSSSNSKQDLMNAMHRWSRISKIIEKK 1628


Top