BLASTX nr result

ID: Cephaelis21_contig00050184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050184
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
emb|CBI32643.3| unnamed protein product [Vitis vinifera]              184   5e-45
ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002525213.1| pentatricopeptide repeat-containing protein,...   174   7e-42
ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38

>ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Vitis vinifera]
          Length = 510

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/105 (80%), Positives = 97/105 (92%)
 Frame = +3

Query: 3   GMLEEARDFIKRMPISPNAIIWGSLLSSCRLHGNVWIGIESAENRLELEPSCAATHLQLA 182
           G+LEEARDFI +MPI PNAIIWGSLLSSCRLHG+VW+GIE+AENRL LEP CAATHLQLA
Sbjct: 364 GLLEEARDFIVKMPIHPNAIIWGSLLSSCRLHGSVWLGIEAAENRLLLEPECAATHLQLA 423

Query: 183 NLYATVGYWDRAARVRKLMKDTGLKTDPGCSWIEIKNEIYQFRVE 317
           +LYA+VG WD+AARVRKLMK  GLKT+PGCSWIE++NEIY+FR E
Sbjct: 424 SLYASVGCWDQAARVRKLMKGKGLKTEPGCSWIEVRNEIYRFRAE 468


>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score =  184 bits (468), Expect = 5e-45
 Identities = 85/105 (80%), Positives = 97/105 (92%)
 Frame = +3

Query: 3    GMLEEARDFIKRMPISPNAIIWGSLLSSCRLHGNVWIGIESAENRLELEPSCAATHLQLA 182
            G+LEEARDFI +MPI PNAIIWGSLLSSCRLHG+VW+GIE+AENRL LEP CAATHLQLA
Sbjct: 1225 GLLEEARDFIVKMPIHPNAIIWGSLLSSCRLHGSVWLGIEAAENRLLLEPECAATHLQLA 1284

Query: 183  NLYATVGYWDRAARVRKLMKDTGLKTDPGCSWIEIKNEIYQFRVE 317
            +LYA+VG WD+AARVRKLMK  GLKT+PGCSWIE++NEIY+FR E
Sbjct: 1285 SLYASVGCWDQAARVRKLMKGKGLKTEPGCSWIEVRNEIYRFRAE 1329


>ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|222868072|gb|EEF05203.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/105 (78%), Positives = 98/105 (93%)
 Frame = +3

Query: 3   GMLEEARDFIKRMPISPNAIIWGSLLSSCRLHGNVWIGIESAENRLELEPSCAATHLQLA 182
           G+LEEA+ FI+RMP+SPNA+IWGSL+SSCRLHG+VWIGI++AEN L LEP CAATH+QLA
Sbjct: 379 GLLEEAQYFIERMPVSPNAVIWGSLVSSCRLHGSVWIGIQAAENTLLLEPECAATHVQLA 438

Query: 183 NLYATVGYWDRAARVRKLMKDTGLKTDPGCSWIEIKNEIYQFRVE 317
           NLYA+VG+WD+AARVRKLMKD  LKT+PGCSWIEIKNE+Y+FR E
Sbjct: 439 NLYASVGFWDQAARVRKLMKDRRLKTNPGCSWIEIKNEVYRFRAE 483


>ref|XP_002525213.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535510|gb|EEF37179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 501

 Score =  174 bits (441), Expect = 7e-42
 Identities = 79/105 (75%), Positives = 96/105 (91%)
 Frame = +3

Query: 3   GMLEEARDFIKRMPISPNAIIWGSLLSSCRLHGNVWIGIESAENRLELEPSCAATHLQLA 182
           G++EEA D I RMPI PNA+IWGSLLSSCRLHG+VWIGI++AE RL LEP+CAATH+QLA
Sbjct: 357 GLIEEALDIILRMPILPNAVIWGSLLSSCRLHGSVWIGIQAAEQRLLLEPACAATHVQLA 416

Query: 183 NLYATVGYWDRAARVRKLMKDTGLKTDPGCSWIEIKNEIYQFRVE 317
           NLYA+V YWD+AA+VRK+MKDTGLKT+PG SWIEIKN++++FR E
Sbjct: 417 NLYASVRYWDKAAKVRKVMKDTGLKTNPGYSWIEIKNKVHRFRAE 461


>ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Cucumis sativus]
           gi|449502632|ref|XP_004161699.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g37320-like [Cucumis sativus]
          Length = 524

 Score =  162 bits (410), Expect = 3e-38
 Identities = 71/105 (67%), Positives = 94/105 (89%)
 Frame = +3

Query: 3   GMLEEARDFIKRMPISPNAIIWGSLLSSCRLHGNVWIGIESAENRLELEPSCAATHLQLA 182
           G+L+EA++FI++MPI+PN+I+WGSLLS+CRLHGNVWIG+++AE+RL L+P CA+THLQL 
Sbjct: 382 GLLKEAQNFIEKMPITPNSIVWGSLLSACRLHGNVWIGLKAAESRLLLQPDCASTHLQLT 441

Query: 183 NLYATVGYWDRAARVRKLMKDTGLKTDPGCSWIEIKNEIYQFRVE 317
           NLYA  GY D AAR+RK+MKD GLKT PG SWIEI+N++Y+F+ E
Sbjct: 442 NLYAKAGYLDDAARLRKIMKDKGLKTAPGYSWIEIQNKVYRFKAE 486


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