BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050131
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...   126   3e-27
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   124   2e-26
gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]         122   4e-26
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   115   8e-24
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   112   5e-23

>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score =  126 bits (317), Expect = 3e-27
 Identities = 75/202 (37%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
 Frame = -3

Query: 600 AENMRVFAEAAKVWNKEVFGHIVQRKNRTVARLRGLQRALETKRSRFXXXXXXXXXXXXE 421
           A ++    E  K WNKEVFG+I QRK++ V  ++ +Q  LE  ++              E
Sbjct: 240 ASDLLYSKEKLKKWNKEVFGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFE 299

Query: 420 SILDQEEALWKQKSCSDWLALGDRNTKYFHTKVKARSRNNYIASL-FLEDKWVDD*EQLM 244
            +L+QEE +W QKS   W+ALGDRNTKYFHT    R R N I  L   E KWV++ E+L 
Sbjct: 300 VVLEQEEIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEPEELA 359

Query: 243 SAAKDYFNRLYTKTD-GTHLSCMRRGRFPKLSARALENLGRAVSFGEVRQALFDMSPLKA 67
             A +Y+ +LY+  D  + +  +    F  L+   + +L +     +V  ++  M   KA
Sbjct: 360 KMAVEYYQKLYSVEDVDSIVERLPSAGFTCLTREEISDLSKPFMSIDVENSMRGMGRFKA 419

Query: 66  PGSDGLHAQFYQSQWNLVGNSV 1
           PG DG    FYQ  W +VG SV
Sbjct: 420 PGPDGYQPVFYQDCWEVVGQSV 441


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  124 bits (310), Expect = 2e-26
 Identities = 77/191 (40%), Positives = 99/191 (51%), Gaps = 2/191 (1%)
 Frame = -3

Query: 567 KVWNKEVFGHIVQRKNRTVARLRGLQRALETKRSRFXXXXXXXXXXXXESILDQEEALWK 388
           K WNKEVFG+I  RK + V+ L+ +Q  LE  ++              + +L QEE LW 
Sbjct: 93  KKWNKEVFGNIHVRKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEETLWF 152

Query: 387 QKSCSDWLALGDRNTKYFHTKVKARSRNNYIASL-FLEDKWVDD*EQLMSAAKDYFNRLY 211
           QKS    LALGDRNT +FHT    R R N I  L   ED+WV + E L   A DY+ +LY
Sbjct: 153 QKSREKLLALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLY 212

Query: 210 TKTDGTHL-SCMRRGRFPKLSARALENLGRAVSFGEVRQALFDMSPLKAPGSDGLHAQFY 34
           +  D + +   +    FP+L+     NL R  +  EV  A+  M   KAPG DG    FY
Sbjct: 213 SLEDVSVVRGTLPTEGFPRLTREEKNNLNRPFTRDEVVVAVRSMGRFKAPGPDGYQPVFY 272

Query: 33  QSQWNLVGNSV 1
           Q  W  VG SV
Sbjct: 273 QQCWETVGESV 283


>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score =  122 bits (307), Expect = 4e-26
 Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
 Frame = -3

Query: 561  WNKEVFGHIVQRKNRTVARLRGLQRALETKRSRFXXXXXXXXXXXXESILDQEEALWKQK 382
            +N +VFG+I  +K     ++  LQ+ LE   S +             + L QEE LW QK
Sbjct: 683  FNSKVFGNIFVKKCELEQQINYLQKRLEVVDSIYLRQKERQLLDDYNNTLVQEELLWFQK 742

Query: 381  SCSDWLALGDRNTKYFHTKVKARSRNNYIASLFLED-KWVDD*EQLMSAAKDYFNRLYTK 205
            S   W+  GDRNT++FH +  AR ++N I  LFL+D  W  D E L   A+ ++  L+  
Sbjct: 743  SIEQWVRFGDRNTRFFHIQTLARRKHNKIHGLFLKDGVWETDPEVLSQEAESFYKSLFCH 802

Query: 204  TDGTHLSCMRRGRFPKLSARALENLGRAVSFGEVRQALFDMSPLKAPGSDGLHAQFYQSQ 25
             D   L C+     P L+ +A  NL   V+  EV+ A+F M+  KAPG DG  A F++  
Sbjct: 803  LDDVDLGCLGDVPLPSLNEKACNNLTAPVTMEEVKAAVFHMNSFKAPGPDGFQAFFFKEY 862

Query: 24   WNLVGNSV 1
            W ++G  V
Sbjct: 863  WEIIGLDV 870


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  115 bits (287), Expect = 8e-24
 Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 4/199 (2%)
 Frame = -3

Query: 585 VFAEAAKVWNKEVFGHIVQRKNRTVARLRGLQRALETKRSRFXXXXXXXXXXXXESILDQ 406
           +F  + K W+K VFG I Q+K R +ARL G+Q++L    S F              +  Q
Sbjct: 277 LFLSSVKSWSKYVFGSIFQKKKRILARLGGIQKSLSIHPSVFLSKLEIDLLVELNELSKQ 336

Query: 405 EEALWKQKSCSDWLALGDRNTKYFHTKVKARSRNNYIASLFLED-KWVDD*EQLMSAAKD 229
           E   W QK+  D   LGD NTKYFHT  K R+    I+ L  ++  WV + E L      
Sbjct: 337 ERVFWAQKAGIDRAKLGDMNTKYFHTLAKIRTCKRKISCLKNDNHDWVSNNEDLKKMMMS 396

Query: 228 YFNRLYTKTDGTHLSCMRRGRFP---KLSARALENLGRAVSFGEVRQALFDMSPLKAPGS 58
           +F +++T +  +H    R   F    ++S    + L R V   E+++AL  M+PLK+PG 
Sbjct: 397 HFEKIFTTSMYSH---QRNNSFRGECRISDEWNKRLARRVEEDEIKEALAQMAPLKSPGP 453

Query: 57  DGLHAQFYQSQWNLVGNSV 1
           DG+ A F++  W  +G SV
Sbjct: 454 DGIQAFFFKKYWEQMGPSV 472


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  112 bits (280), Expect = 5e-23
 Identities = 72/189 (38%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
 Frame = -3

Query: 561 WNKEVFGHIVQRKNRTVARLRGLQRALETKRSRFXXXXXXXXXXXXESILDQEEALWKQK 382
           WN+EVFG I  RK + VA ++ +Q  L    S              + +L+QEE LW QK
Sbjct: 143 WNREVFGDIHVRKEKLVADIKEVQDLLGVVLSDDLLAKEEVLLKEMDLVLEQEETLWFQK 202

Query: 381 SCSDWLALGDRNTKYFHTKVKARSRNNYIASL-FLEDKWVDD*EQLMSAAKDYFNRLYTK 205
           S   ++ LGDRNT +FHT    R R N I SL   +D+WV D  +L + A  Y+ RLY+ 
Sbjct: 203 SREKYIELGDRNTTFFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMALTYYKRLYSL 262

Query: 204 TDGTHL-SCMRRGRFPKLSARALENLGRAVSFGEVRQALFDMSPLKAPGSDGLHAQFYQS 28
            D + + + +  G F  +S      L +A +  EV  A+  M   KAPG DG    FYQ 
Sbjct: 263 EDVSEVRNMLPTGGFASISEAEKAALLQAFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQQ 322

Query: 27  QWNLVGNSV 1
            W  VG SV
Sbjct: 323 CWETVGPSV 331