BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050123
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...   151   6e-35
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]   151   6e-35
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...   135   3e-30
ref|XP_002867315.1| pentatricopeptide repeat-containing protein ...   134   6e-30

>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/127 (55%), Positives = 93/127 (73%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           FD MPHRD ++WNS+IN Y+ NG+  E++ A  D+Y+ G  PKPEL+ASV+S C +    
Sbjct: 109 FDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGS 168

Query: 182 GFGKLIHTLVIVDERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMITG 361
             G+ IH LV+V+ER  +S+FLSTALVDFY+RC D  MA  VF+ M V+N VSWT MI+G
Sbjct: 169 KIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISG 228

Query: 362 CVANHDY 382
           C+A+ DY
Sbjct: 229 CIAHQDY 235



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/112 (25%), Positives = 59/112 (52%)
 Frame = +2

Query: 38  NSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECFGFGKLIHTLVIV 217
           ++ I  ++  G   ++++ F ++++CG       + SV+ A   A+C  FG  +H L + 
Sbjct: 20  SNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALK 79

Query: 218 DERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMITGCVAN 373
                E+V +S +++  Y++  D   A  VF+ M  R+ ++W ++I G + N
Sbjct: 80  TGSHSETV-VSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHN 130


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/131 (56%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           FD MPHRDT++WNSMIN Y+QNG  +E+++  +D Y  GF PKPEL+AS++S C +    
Sbjct: 124 FDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDL 183

Query: 182 GF--GKLIHTLVIVDE--RADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTA 349
           G+  G+ IH LV+VD   R   SVFLSTA VDFY+RC D  MA  VF+ M V+NEVSWTA
Sbjct: 184 GWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTA 243

Query: 350 MITGCVANHDY 382
           +I+GC  N DY
Sbjct: 244 VISGCANNQDY 254



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/129 (29%), Positives = 63/129 (48%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           F+    RD V W+S+I  Y + G S ++++ F  M      P    + +V+SAC     F
Sbjct: 332 FEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSF 391

Query: 182 GFGKLIHTLVIVDERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMITG 361
             G +IH   I+      S+F+  AL++ Y +C     +  +F  M  R+ V+W +MI+ 
Sbjct: 392 KHGGVIHG-YILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMIS- 449

Query: 362 CVANHDYGK 388
               H YG+
Sbjct: 450 AYGLHGYGE 458


>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 460

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/131 (56%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           FD MPHRDT++WNSMIN Y+QNG  +E+++  +D Y  GF PKPEL+AS++S C +    
Sbjct: 124 FDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDL 183

Query: 182 GF--GKLIHTLVIVDE--RADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTA 349
           G+  G+ IH LV+VD   R   SVFLSTA VDFY+RC D  MA  VF+ M V+NEVSWTA
Sbjct: 184 GWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTA 243

Query: 350 MITGCVANHDY 382
           +I+GC  N DY
Sbjct: 244 VISGCANNQDY 254



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/129 (29%), Positives = 63/129 (48%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           F+    RD V W+S+I  Y + G S ++++ F  M      P    + +V+SAC     F
Sbjct: 332 FEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSF 391

Query: 182 GFGKLIHTLVIVDERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMITG 361
             G +IH   I+      S+F+  AL++ Y +C     +  +F  M  R+ V+W +MI+ 
Sbjct: 392 KHGGVIHG-YILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMIS- 449

Query: 362 CVANHDYGK 388
               H YG+
Sbjct: 450 AYGLHGYGE 458


>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score =  135 bits (340), Expect = 3e-30
 Identities = 60/127 (47%), Positives = 88/127 (69%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           FD MP +D +SWN +IN Y QNG+  +    F++MY CG  PKPEL+ASV+S C++    
Sbjct: 84  FDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDM 143

Query: 182 GFGKLIHTLVIVDERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMITG 361
             G+ IH LV++D R  + +F+ T+LVD+Y++  D  MA  VF+++ V+N VSWTA+++G
Sbjct: 144 KLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSG 203

Query: 362 CVANHDY 382
           C AN DY
Sbjct: 204 CSANLDY 210


>ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313151|gb|EFH43574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/128 (50%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQ-AEC 178
           FD+M  RDTVS+ S++NCY Q+G   E+++  ++MY  GF PK EL+AS+L+ C +    
Sbjct: 105 FDEMLQRDTVSYCSIVNCYCQDGLLSEAMKLLKEMYFYGFVPKSELVASLLALCTRMGSS 164

Query: 179 FGFGKLIHTLVIVDERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMIT 358
               +++H LV+VDER  ESV LSTAL+D Y +  D   AF VF++M ++NEVSWTAMI+
Sbjct: 165 SKVARMLHALVLVDERIQESVLLSTALLDMYLKFDDPAAAFHVFDQMELKNEVSWTAMIS 224

Query: 359 GCVANHDY 382
           GCVAN++Y
Sbjct: 225 GCVANYNY 232



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/118 (29%), Positives = 57/118 (48%)
 Frame = +2

Query: 2   FDKMPHRDTVSWNSMINCYVQNGFSLESIRAFRDMYVCGFFPKPELIASVLSACIQAECF 181
           F+    RD V W+SMI+ Y +NG   E++     M   G  P    + +V+SAC  +   
Sbjct: 310 FETSKVRDVVMWSSMISGYAENGDCSEAMNLLSQMRKEGSEPNSVTLLAVVSACTHSASL 369

Query: 182 GFGKLIHTLVIVDERADESVFLSTALVDFYWRCRDRKMAFCVFERMAVRNEVSWTAMI 355
                +H+ ++        + LS AL+D Y +C     A  VF  +  ++ VSW++MI
Sbjct: 370 KIASTVHSQILKCGFMSH-ILLSNALIDMYAKCGSLPAAREVFYELNEKDLVSWSSMI 426