BLASTX nr result

ID: Cephaelis21_contig00050115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050115
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   192   3e-47
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   192   3e-47
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   191   7e-47
ref|XP_003575560.1| PREDICTED: uncharacterized protein LOC100823...   191   7e-47
ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partia...   189   2e-46

>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/99 (90%), Positives = 95/99 (95%)
 Frame = +2

Query: 2    PPLHSCLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLR 181
            PPL SCLSEDKNGMTHAILEVVAGGIVQTA DIHRYVRCTLLNSTKPF+DVVKSAQDSLR
Sbjct: 935  PPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQDVVKSAQDSLR 994

Query: 182  WLCHKRFLEWNEDTKLYTTTPLGRASFGSSLSPEESLVV 298
            WLCH++FLEWNE+TKLYTTTPLGR SFGSSL PEESL+V
Sbjct: 995  WLCHRKFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIV 1033


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/99 (90%), Positives = 95/99 (95%)
 Frame = +2

Query: 2    PPLHSCLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLR 181
            PPL SCLSEDKNGMTHAILEVVAGGIVQTA DIHRYVRCTLLNSTKPF+DVVKSAQDSLR
Sbjct: 936  PPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQDVVKSAQDSLR 995

Query: 182  WLCHKRFLEWNEDTKLYTTTPLGRASFGSSLSPEESLVV 298
            WLCH++FLEWNE+TKLYTTTPLGR SFGSSL PEESL+V
Sbjct: 996  WLCHRKFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIV 1034


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  191 bits (484), Expect = 7e-47
 Identities = 90/99 (90%), Positives = 97/99 (97%)
 Frame = +2

Query: 2    PPLHSCLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLR 181
            PPL+SCLSEDKNGMTHAILEVVA GIVQTANDI+RYVRCTLLNSTKPF+DVVKSAQDSLR
Sbjct: 945  PPLYSCLSEDKNGMTHAILEVVASGIVQTANDINRYVRCTLLNSTKPFQDVVKSAQDSLR 1004

Query: 182  WLCHKRFLEWNEDTKLYTTTPLGRASFGSSLSPEESLVV 298
            WLCH++FLEWNEDTKLY+TTPLGRA+FGSSL PEESLVV
Sbjct: 1005 WLCHRKFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLVV 1043


>ref|XP_003575560.1| PREDICTED: uncharacterized protein LOC100823290 [Brachypodium
            distachyon]
          Length = 2057

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/99 (89%), Positives = 96/99 (96%)
 Frame = +2

Query: 2    PPLHSCLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLR 181
            PPL SCLSEDKNGMTHAI+EVVAGGIVQTA+DIHRYVRCTLLNSTKPF+DVVKSAQDSLR
Sbjct: 933  PPLQSCLSEDKNGMTHAIMEVVAGGIVQTASDIHRYVRCTLLNSTKPFDDVVKSAQDSLR 992

Query: 182  WLCHKRFLEWNEDTKLYTTTPLGRASFGSSLSPEESLVV 298
            WLCHKRF+EWN DTK+Y+TTPLGRA FGSSL+PEESLVV
Sbjct: 993  WLCHKRFVEWNNDTKIYSTTPLGRACFGSSLNPEESLVV 1031


>ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus]
          Length = 1607

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/99 (90%), Positives = 95/99 (95%)
 Frame = +2

Query: 2   PPLHSCLSEDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLLNSTKPFEDVVKSAQDSLR 181
           PPL SCLSEDKNGMTHAILEVVAGGIVQTA DIHRYVRCTLLNSTKPF+DVVKSAQ+SLR
Sbjct: 395 PPLQSCLSEDKNGMTHAILEVVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLR 454

Query: 182 WLCHKRFLEWNEDTKLYTTTPLGRASFGSSLSPEESLVV 298
           WLCH +FLEWN DTKLY+TTPLGRASFGSSLSPEESL+V
Sbjct: 455 WLCHGKFLEWNGDTKLYSTTPLGRASFGSSLSPEESLIV 493


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