BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050114
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   122   2e-26
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   117   1e-24
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   115   3e-24
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   115   3e-24
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...   115   5e-24

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/112 (52%), Positives = 80/112 (71%)
 Frame = -3

Query: 337 IFYIGTDRAPKPDGYTSCFFRHS*NTVGEDVCAAIWEFFSSGRLLKQINHTIIALLPKSS 158
           IF +  D++P PDGYTS F++ S   +G++V  AI  FF+ G L K +N TI+AL+PK  
Sbjct: 183 IFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKK 242

Query: 157 HATSVGDYRPISCCNIIYKAISKILASRMAKVLPHIIHEAQSAFVKGRSMVE 2
            A  + DYRPISCCN++YKAISKILA+R+ ++LP  I   QSAFVK R ++E
Sbjct: 243 EAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIE 294


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/112 (50%), Positives = 79/112 (70%)
 Frame = -3

Query: 337 IFYIGTDRAPKPDGYTSCFFRHS*NTVGEDVCAAIWEFFSSGRLLKQINHTIIALLPKSS 158
           +F + +D++P PDGYTS FF+ +   +G++   A+  FF+ G L K IN TI+AL+PK +
Sbjct: 462 LFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKT 521

Query: 157 HATSVGDYRPISCCNIIYKAISKILASRMAKVLPHIIHEAQSAFVKGRSMVE 2
            A  + DYRPISCCN++YK ISKI+A+R+  VLP  I   QSAFVK R ++E
Sbjct: 522 EAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIE 573


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/111 (50%), Positives = 78/111 (70%)
 Frame = -3

Query: 334 FYIGTDRAPKPDGYTSCFFRHS*NTVGEDVCAAIWEFFSSGRLLKQINHTIIALLPKSSH 155
           F + ++++P PDGYTS FF+ + + VG  + AA+ EFF SGRLL Q N T + ++PK  +
Sbjct: 456 FALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPN 515

Query: 154 ATSVGDYRPISCCNIIYKAISKILASRMAKVLPHIIHEAQSAFVKGRSMVE 2
           A  + ++RPISCCN IYK ISK+LA R+  +LP  I  +QSAFVKGR + E
Sbjct: 516 ADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTE 566


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/112 (50%), Positives = 77/112 (68%)
 Frame = -3

Query: 337 IFYIGTDRAPKPDGYTSCFFRHS*NTVGEDVCAAIWEFFSSGRLLKQINHTIIALLPKSS 158
           +F +  D++P PDGYT+ F++ + N +G +   AI  FF+ G L K IN TI+AL+PK  
Sbjct: 350 VFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKK 409

Query: 157 HATSVGDYRPISCCNIIYKAISKILASRMAKVLPHIIHEAQSAFVKGRSMVE 2
            A  + DYRPISCCN++YK ISKI+A+R+  VLP  I   QSAFVK R ++E
Sbjct: 410 EAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIE 461


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/112 (49%), Positives = 77/112 (68%)
 Frame = -3

Query: 337  IFYIGTDRAPKPDGYTSCFFRHS*NTVGEDVCAAIWEFFSSGRLLKQINHTIIALLPKSS 158
            +F +  D++P PDGYTS F++ + + +G +   A+  FF  G L K +N TI+AL+PK  
Sbjct: 877  LFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKL 936

Query: 157  HATSVGDYRPISCCNIIYKAISKILASRMAKVLPHIIHEAQSAFVKGRSMVE 2
             A  + DYRPISCCN+IYK ISKI+A+R+  VLP+ I   QSAFVK R ++E
Sbjct: 937  EAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIE 988