BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050113
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   1e-25
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    79   1e-25
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...    84   1e-24
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    74   5e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    72   2e-23

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 87.0 bits (214), Expect(2) = 1e-25
 Identities = 39/70 (55%), Positives = 51/70 (72%)
 Frame = -3

Query: 212 ILYEAQSAFVKGRSMVENIHLAQELIAKYARKRVSPRCLIKVDIRKVYDSVSWTFLRSIM 33
           ++ EAQS F+ GR + +NI LA ELI  Y RK +SPRC++KVDIRK YDSV W+FL +++
Sbjct: 542 VVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLL 601

Query: 32  LGLGFPQMFV 3
              GFP  FV
Sbjct: 602 YEFGFPSRFV 611



 Score = 54.7 bits (130), Expect(2) = 1e-25
 Identities = 22/45 (48%), Positives = 33/45 (73%)
 Frame = -2

Query: 339 IVLLPKSSHATSLGDYRPISCCNVIYKAISKILASRMAKVLPHII 205
           + LLPK  HAT + ++RPI+CC VIYK ISK+L +RM  ++  ++
Sbjct: 499 VTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVV 543


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 79.0 bits (193), Expect(2) = 1e-25
 Identities = 36/65 (55%), Positives = 48/65 (73%)
 Frame = -3

Query: 197 QSAFVKGRSMVENIHLAQELIAKYARKRVSPRCLIKVDIRKVYDSVSWTFLRSIMLGLGF 18
           QSAF+K R ++EN+ LA EL+  Y +  VS RC IK+DI K +DSV W+FLR+++L L F
Sbjct: 80  QSAFIKDRLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDF 139

Query: 17  PQMFV 3
           PQ FV
Sbjct: 140 PQEFV 144



 Score = 62.8 bits (151), Expect(2) = 1e-25
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -2

Query: 339 IVLLPKSSHATSLGDYRPISCCNVIYKAISKILASRMAKVLPHII*GS 196
           + L+PK   A  + DYRPISCCNV+YK ISKI+A+R+ +VLP  I G+
Sbjct: 32  LALIPKKMEAKEIKDYRPISCCNVLYKVISKIIANRLKRVLPQFIAGN 79


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score = 83.6 bits (205), Expect(2) = 1e-24
 Identities = 36/70 (51%), Positives = 53/70 (75%)
 Frame = -3

Query: 212 ILYEAQSAFVKGRSMVENIHLAQELIAKYARKRVSPRCLIKVDIRKVYDSVSWTFLRSIM 33
           ++ E QSAFVKGR + +NI L+ EL+  Y+RK +SPRC++K+D++K Y+SV W F++ +M
Sbjct: 225 VVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIKHLM 284

Query: 32  LGLGFPQMFV 3
           L LGF   FV
Sbjct: 285 LELGFSYKFV 294



 Score = 54.7 bits (130), Expect(2) = 1e-24
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = -2

Query: 339 IVLLPKSSHATSLGDYRPISCCNVIYKAISKILASRMAKVLPHII 205
           + LLPK  + TS+ ++RPI+CC+VIYK ISKIL SRM  VL  ++
Sbjct: 182 MTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVV 226


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 73.6 bits (179), Expect(2) = 5e-24
 Identities = 33/65 (50%), Positives = 46/65 (70%)
 Frame = -3

Query: 197  QSAFVKGRSMVENIHLAQELIAKYARKRVSPRCLIKVDIRKVYDSVSWTFLRSIMLGLGF 18
            QSAFVK R ++EN+ LA EL+  Y +  +S RC IK+DI K +DSV W+FL++++  L F
Sbjct: 977  QSAFVKDRLLIENLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDF 1036

Query: 17   PQMFV 3
            P  FV
Sbjct: 1037 PPEFV 1041



 Score = 62.4 bits (150), Expect(2) = 5e-24
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = -2

Query: 339  IVLLPKSSHATSLGDYRPISCCNVIYKAISKILASRMAKVLPHII*GS 196
            + L+PK   A  + DYRPISCCNVIYK ISKI+A+R+  VLP+ I G+
Sbjct: 929  LALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGN 976


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 72.4 bits (176), Expect(2) = 2e-23
 Identities = 33/65 (50%), Positives = 45/65 (69%)
 Frame = -3

Query: 197 QSAFVKGRSMVENIHLAQELIAKYARKRVSPRCLIKVDIRKVYDSVSWTFLRSIMLGLGF 18
           QSAFVK R ++EN+ LA EL+  Y +  +S RC IK+DI K +DSV W FL ++   LGF
Sbjct: 562 QSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGF 621

Query: 17  PQMFV 3
           P+ F+
Sbjct: 622 PREFI 626



 Score = 61.6 bits (148), Expect(2) = 2e-23
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = -2

Query: 339 IVLLPKSSHATSLGDYRPISCCNVIYKAISKILASRMAKVLPHII*GS 196
           + L+PK + A  + DYRPISCCNV+YK ISKI+A+R+  VLP  I G+
Sbjct: 514 LALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGN 561