BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00050035
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   211   8e-53
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-49
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   192   4e-47
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   191   6e-47
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-45

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  211 bits (537), Expect = 8e-53
 Identities = 118/195 (60%), Positives = 138/195 (70%), Gaps = 2/195 (1%)
 Frame = +3

Query: 24  IPVPSSSF--PHNCCYSIIVPVPLLVFKNYSARFRNHFKLVAFSLPSSSSKDVWRREQXX 197
           +P  SSSF  PH       +  P     N + + R  F LV      S  KDVWRR    
Sbjct: 16  LPSSSSSFFSPHISYIKTNIFSPF----NKTQKHRACFILV------SVFKDVWRRLPDE 65

Query: 198 XXXXXXXHQVHRRTQDNVVYLDRSVNMDELLSSIAQTTNEQELYTLISLYKDRTLSIRFM 377
                   + HR  +  VV+LD SV+MDELL+SI+QT+NEQELY+L+S YK R LSIRFM
Sbjct: 66  TTSLLSSSRQHRPRKQRVVHLDHSVDMDELLASISQTSNEQELYSLMSPYKGRQLSIRFM 125

Query: 378 VRLLSREPDWQRSLALLDWMNDEALYTPSVLAYNVVLRNVLRAKQWQLAQGLFDEMRQRA 557
           V LLSREPDWQRSLALLDW+N+EA Y+PSV AYNVV+RNVLRAKQW+LA GLF+EMRQRA
Sbjct: 126 VSLLSREPDWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRA 185

Query: 558 LSPDRYTYSTLITHF 602
           L+PDRYTYSTLITHF
Sbjct: 186 LAPDRYTYSTLITHF 200


>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
           gi|449530101|ref|XP_004172035.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  200 bits (508), Expect = 2e-49
 Identities = 108/187 (57%), Positives = 133/187 (71%), Gaps = 11/187 (5%)
 Frame = +3

Query: 75  VPVPLLVFKNYSARFRNHFKL-------VAFSLPSSSSKDVWRR----EQXXXXXXXXXH 221
           +P+ L+  +NY     N  K+       +  +  SS+SKD+WRR    E+         +
Sbjct: 18  IPLFLIETRNYPKVRFNKIKIKPRTRIPIFTASSSSTSKDIWRRQTPSEKSTTTLLPQKY 77

Query: 222 QVHRRTQDNVVYLDRSVNMDELLSSIAQTTNEQELYTLISLYKDRTLSIRFMVRLLSREP 401
           Q   R      +LD S++MDELL+SI QT NEQELY+++S YK R LS+RFMV LLSRE 
Sbjct: 78  QRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRES 137

Query: 402 DWQRSLALLDWMNDEALYTPSVLAYNVVLRNVLRAKQWQLAQGLFDEMRQRALSPDRYTY 581
           DWQRSLA+LDW+N+EALYTPSV AYNVVLRNVLRAKQW+LA GLFDEMRQRAL+ DRYTY
Sbjct: 138 DWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTY 197

Query: 582 STLITHF 602
           STLIT+F
Sbjct: 198 STLITYF 204


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316573|gb|EFH46996.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 680

 Score =  192 bits (488), Expect = 4e-47
 Identities = 101/153 (66%), Positives = 122/153 (79%), Gaps = 1/153 (0%)
 Frame = +3

Query: 147 SLPSSSSKDVWRRE-QXXXXXXXXXHQVHRRTQDNVVYLDRSVNMDELLSSIAQTTNEQE 323
           S PS+ +K VWR++ +          + HRR Q +  +LD +V+MDELL+SI QT NE+E
Sbjct: 51  SSPSTQTKKVWRKQPEKNTTSSFQALRKHRRYQRSA-FLDHNVDMDELLASIHQTQNEKE 109

Query: 324 LYTLISLYKDRTLSIRFMVRLLSREPDWQRSLALLDWMNDEALYTPSVLAYNVVLRNVLR 503
           L++L+S YKDR LSIRFMV LLSRE DWQRSLALLDW+++EA YTPSV AYNVVLRNVLR
Sbjct: 110 LFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLR 169

Query: 504 AKQWQLAQGLFDEMRQRALSPDRYTYSTLITHF 602
           AKQ+ +A GLFDEMRQRAL+PDRYTYSTLIT F
Sbjct: 170 AKQFGIAHGLFDEMRQRALAPDRYTYSTLITSF 202


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score =  191 bits (486), Expect = 6e-47
 Identities = 112/197 (56%), Positives = 137/197 (69%), Gaps = 3/197 (1%)
 Frame = +3

Query: 21  SIPVPSSSFPHNCCYSIIVPVPLLVFKNYSARFRNHFKLVAFSLPSSSS--KDVWRRE-Q 191
           S+P+   + PH     I   +P        AR RN    V+ S  S S+  K VWR++ +
Sbjct: 12  SLPLLPLTRPH-----IYTSIPFSTIPE--ARQRNLIFTVSASSSSESTQNKKVWRKQPE 64

Query: 192 XXXXXXXXXHQVHRRTQDNVVYLDRSVNMDELLSSIAQTTNEQELYTLISLYKDRTLSIR 371
                     + HRR Q +  +LD +V+MDELL+SI QT NE+EL++L+S YKDR LSIR
Sbjct: 65  KNTTSSFQALRKHRRYQRSA-FLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIR 123

Query: 372 FMVRLLSREPDWQRSLALLDWMNDEALYTPSVLAYNVVLRNVLRAKQWQLAQGLFDEMRQ 551
           FMV LLSRE DWQRSLALLDW+++EA YTPSV AYNVVLRNVLRAKQ+ +A GLFDEMRQ
Sbjct: 124 FMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQ 183

Query: 552 RALSPDRYTYSTLITHF 602
           RAL+PDRYTYSTLIT F
Sbjct: 184 RALAPDRYTYSTLITSF 200


>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  187 bits (475), Expect = 1e-45
 Identities = 96/151 (63%), Positives = 112/151 (74%)
 Frame = +3

Query: 150 LPSSSSKDVWRREQXXXXXXXXXHQVHRRTQDNVVYLDRSVNMDELLSSIAQTTNEQELY 329
           L ++ +KDVW R               RR Q    YLDRSV+M+ LL++I QT NE ELY
Sbjct: 42  LATAMAKDVWTRTSSSNTSRQRSSSSSRRQQQ---YLDRSVDMEVLLAAIGQTQNEDELY 98

Query: 330 TLISLYKDRTLSIRFMVRLLSREPDWQRSLALLDWMNDEALYTPSVLAYNVVLRNVLRAK 509
            ++S Y  R LS+RFMV LLSREPDWQR+LALLDW+ND+ALY PS+ AYNV+LRNVLRAK
Sbjct: 99  AVMSPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYRPSLFAYNVLLRNVLRAK 158

Query: 510 QWQLAQGLFDEMRQRALSPDRYTYSTLITHF 602
           QW LA GLFDEMRQ+ LSPDRYTYSTLIT F
Sbjct: 159 QWHLAHGLFDEMRQKGLSPDRYTYSTLITCF 189