BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049979
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    96   3e-18
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               94   1e-17
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    94   1e-17
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    94   1e-17
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              92   6e-17

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +1

Query: 82   DRCAWKLSNTGKFNAAKAYKELSSHSWDQPSQEATL--IWKTICPQRVKTFLWLAWKQKL 255
            D  +WK +  G F    AY  L     D+P+  +    IWK I P+RV+ F+WL  +  +
Sbjct: 868  DEISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVI 927

Query: 256  MTNDNRTKRSFTDDASCPQCGSPQETTLHVLRDCPYARDVWDKIIPTPDLPNFYSQQREP 435
            MTN  R +R  +++A C  C   +ET LHVLRDCP    +W +++P      F+SQ    
Sbjct: 928  MTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLE 987

Query: 436  WL 441
            WL
Sbjct: 988  WL 989


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +1

Query: 67  LTDPEDRCAWKLSNTGKFNAAKAYKELSSHSWDQPSQEA--TLIWKTICPQRVKTFLWLA 240
           +T   DR +WK S  G+F+   AY+ L+     +P+  +    +WK   P+RVKTFLWL 
Sbjct: 357 VTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLV 416

Query: 241 WKQKLMTNDNRTKRSFTDDASCPQCGSPQETTLHVLRDCPYARDVWDKIIPTPDLPNFYS 420
             Q +MT + R +R  +    C  C    E+ LHVLRDCP    +W +++P      F+S
Sbjct: 417 GNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFS 476

Query: 421 QQREPWL 441
           +    WL
Sbjct: 477 KSLFEWL 483


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +1

Query: 67  LTDPEDRCAWKLSNTGKFNAAKAYKELSSHSWDQPSQEA--TLIWKTICPQRVKTFLWLA 240
           +T   DR +WK S  G+F+   AY+ L+     +P+  +    +WK   P+RVKTFLWL 
Sbjct: 248 VTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLV 307

Query: 241 WKQKLMTNDNRTKRSFTDDASCPQCGSPQETTLHVLRDCPYARDVWDKIIPTPDLPNFYS 420
             Q +MT + R +R  +    C  C    E+ LHVLRDCP    +W +++P      F+S
Sbjct: 308 GNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFS 367

Query: 421 QQREPWL 441
           +    WL
Sbjct: 368 KSLFEWL 374


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
 Frame = +1

Query: 67  LTDPEDRCAWKLSNTGKFNAAKAYKELSSHSWDQP--SQEATLIWKTICPQRVKTFLWLA 240
           +T   DR +W  S  GKF    AY  L   +  +   S+    +WK I P+RVK FLWL 
Sbjct: 427 ITGVRDRLSWGESLDGKFTVKSAYSSLMKDNTPRSDLSRMYDRVWKVIAPERVKIFLWLG 486

Query: 241 WKQKLMTNDNRTKRSFTDDASCPQCGSPQETTLHVLRDCPYARDVWDKIIPTPDLPNFYS 420
             Q +MTN  R +R  +D   C  C    ET +H+LRDCP    +W +IIP      F++
Sbjct: 487 VHQVIMTNMERQRRHLSDTGICQVCKGGDETIIHILRDCPAMYGIWTRIIPRRKRGTFFT 546

Query: 421 QQREPWL 441
           Q    W+
Sbjct: 547 QTLLEWV 553


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/129 (34%), Positives = 65/129 (50%)
 Frame = +1

Query: 7    LETVLEINLVHIIAGYPPSKLTDPEDRCAWKLSNTGKFNAAKAYKELSSHSWDQPSQEAT 186
            L  +L IN++ ++   P +  ++ ED  +W  S TG    + AY  ++ H  D  S +  
Sbjct: 1513 LHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLIAGHDGDGRSHD-- 1570

Query: 187  LIWKTICPQRVKTFLWLAWKQKLMTNDNRTKRSFTDDASCPQCGSPQETTLHVLRDCPYA 366
             IW+  C +++K F+W   K  LM N  R +R   D ASCP CG   ET  H+ R C  A
Sbjct: 1571 WIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLA 1630

Query: 367  RDVWDKIIP 393
               WD  +P
Sbjct: 1631 EACWDSAVP 1639