BLASTX nr result

ID: Cephaelis21_contig00049883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049883
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW86827.1| hypothetical protein ZEAMMB73_415054 [Zea mays]        206   2e-51
emb|CBX33210.1| NADH dehydrogenase subunit 1 (mitochondrion) [Be...   202   3e-50
ref|YP_003875500.1| NADH dehydrogenase subunit 1 [Silene latifol...   202   3e-50
dbj|BAA99457.2| NADH dehydrogenase subunit 1 [Beta vulgaris subs...   202   3e-50
ref|YP_004222262.1| NADH dehydrogenase subunit 1 [Beta vulgaris ...   202   3e-50

>gb|AFW86827.1| hypothetical protein ZEAMMB73_415054 [Zea mays]
          Length = 161

 Score =  206 bits (523), Expect = 2e-51
 Identities = 105/133 (78%), Positives = 111/133 (83%)
 Frame = -3

Query: 412 MAFVQRRRGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVTTFMLSLVAWA 233
           MAFVQRR+G DVVGSFGLLQPLADG KLILKEPISPSSANF LFRMAP+ TFMLSLVAWA
Sbjct: 1   MAFVQRRKGLDVVGSFGLLQPLADGFKLILKEPISPSSANFSLFRMAPMATFMLSLVAWA 60

Query: 232 VVPFDYGMVLSDLNIGLLFLFAISSLGVYGIIIAGWSSN*GAAVRSPMILGPIGKKWVCA 53
           +VPFDYGM+L D NIGLL+LFAISSLGVYGIIIAGWSS  G        +     KWVCA
Sbjct: 61  IVPFDYGMILLDPNIGLLYLFAISSLGVYGIIIAGWSSKTGGGRSVAYDIRTNWSKWVCA 120

Query: 52  AGVERYTLHRCGL 14
           AGVER TLHRCGL
Sbjct: 121 AGVERSTLHRCGL 133


>emb|CBX33210.1| NADH dehydrogenase subunit 1 (mitochondrion) [Beta vulgaris subsp.
           maritima] gi|384977888|emb|CBL54110.1| NADH
           dehydrogenase subunit 1 (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 325

 Score =  202 bits (513), Expect = 3e-50
 Identities = 105/119 (88%), Positives = 107/119 (89%)
 Frame = -3

Query: 472 GIIXXXXXXXXXXXXAERKVMAFVQRRRGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 293
           GII            AERKVMAFVQRR+GPDVVGSFGLLQPLADGLKLILKEPISPSSAN
Sbjct: 11  GIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

Query: 292 FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLFLFAISSLGVYGIIIAGWSSN 116
           FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLL+LFAISSLGVYGIIIAGWSSN
Sbjct: 71  FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSN 129


>ref|YP_003875500.1| NADH dehydrogenase subunit 1 [Silene latifolia]
           gi|296040791|gb|ADG85363.1| NADH dehydrogenase subunit 1
           [Silene latifolia] gi|301338042|gb|ADK73334.1| NADH
           dehydrogenase subunit 1 [Silene latifolia]
          Length = 325

 Score =  202 bits (513), Expect = 3e-50
 Identities = 105/119 (88%), Positives = 107/119 (89%)
 Frame = -3

Query: 472 GIIXXXXXXXXXXXXAERKVMAFVQRRRGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 293
           GII            AERKVMAFVQRR+GPDVVGSFGLLQPLADGLKLILKEPISPSSAN
Sbjct: 11  GIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

Query: 292 FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLFLFAISSLGVYGIIIAGWSSN 116
           FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLL+LFAISSLGVYGIIIAGWSSN
Sbjct: 71  FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSN 129


>dbj|BAA99457.2| NADH dehydrogenase subunit 1 [Beta vulgaris subsp. vulgaris]
          Length = 325

 Score =  202 bits (513), Expect = 3e-50
 Identities = 105/119 (88%), Positives = 107/119 (89%)
 Frame = -3

Query: 472 GIIXXXXXXXXXXXXAERKVMAFVQRRRGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 293
           GII            AERKVMAFVQRR+GPDVVGSFGLLQPLADGLKLILKEPISPSSAN
Sbjct: 11  GIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

Query: 292 FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLFLFAISSLGVYGIIIAGWSSN 116
           FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLL+LFAISSLGVYGIIIAGWSSN
Sbjct: 71  FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSN 129


>ref|YP_004222262.1| NADH dehydrogenase subunit 1 [Beta vulgaris subsp. maritima]
           gi|346683117|ref|YP_004842069.1| NADH dehydrogenase
           subunit 1 [Beta macrocarpa] gi|87248031|gb|ABD36070.1|
           NADH dehydrogenase subunit 1 [Beta vulgaris subsp.
           vulgaris] gi|317905580|emb|CBJ13992.1| NADH
           dehydrogenase subunit 1 [Beta vulgaris subsp. maritima]
           gi|319439755|emb|CBJ17480.1| NADH dehydrogenase subunit
           1 [Beta vulgaris subsp. maritima]
           gi|320147992|emb|CBX33244.1| NADH dehydrogenase subunit
           1 [Beta vulgaris subsp. maritima]
           gi|320148699|emb|CBJ23337.1| NADH dehydrogenase subunit
           1 [Beta vulgaris subsp. maritima]
           gi|345500035|emb|CBX24851.1| NADH dehydrogenase subunit
           1 [Beta macrocarpa]
          Length = 325

 Score =  202 bits (513), Expect = 3e-50
 Identities = 105/119 (88%), Positives = 107/119 (89%)
 Frame = -3

Query: 472 GIIXXXXXXXXXXXXAERKVMAFVQRRRGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 293
           GII            AERKVMAFVQRR+GPDVVGSFGLLQPLADGLKLILKEPISPSSAN
Sbjct: 11  GIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

Query: 292 FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLFLFAISSLGVYGIIIAGWSSN 116
           FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLL+LFAISSLGVYGIIIAGWSSN
Sbjct: 71  FFLFRMAPVTTFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSN 129


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