BLASTX nr result

ID: Cephaelis21_contig00049840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049840
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36340.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_003612499.1| Pentatricopeptide repeat-containing protein ...   123   2e-26

>emb|CBI36340.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -3

Query: 303 KAEYLAFHSEKLAIAYALLKTPPNVPIRVIKNLRMCDDCHLAAKLIAKVTNRLIVVRDAN 124
           K EY+++HSEKLAIAY L+KTP   PIRVIKNLRMC DCH A KLI+KVTNR+I+VRDAN
Sbjct: 555 KREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDAN 614

Query: 123 RFHTFKDGNCSCADYW 76
           RFH F DG CSCADYW
Sbjct: 615 RFHCFGDGGCSCADYW 630


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -3

Query: 303 KAEYLAFHSEKLAIAYALLKTPPNVPIRVIKNLRMCDDCHLAAKLIAKVTNRLIVVRDAN 124
           K EY+++HSEKLAIAY L+KTP   PIRVIKNLRMC DCH A KLI+KVTNR+I+VRDAN
Sbjct: 628 KREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDAN 687

Query: 123 RFHTFKDGNCSCADYW 76
           RFH F DG CSCADYW
Sbjct: 688 RFHCFGDGGCSCADYW 703


>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/76 (71%), Positives = 65/76 (85%)
 Frame = -3

Query: 303 KAEYLAFHSEKLAIAYALLKTPPNVPIRVIKNLRMCDDCHLAAKLIAKVTNRLIVVRDAN 124
           K  YL++HSEKLA+AY L+K P   PIR+IKNLRMCDDCH A KLI+KVTNRLI+VRDAN
Sbjct: 619 KEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDAN 678

Query: 123 RFHTFKDGNCSCADYW 76
           RFH F+DG+C+C D+W
Sbjct: 679 RFHHFRDGSCTCLDHW 694


>ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like, partial [Cucumis sativus]
          Length = 390

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = -3

Query: 303 KAEYLAFHSEKLAIAYALLKTPPNVPIRVIKNLRMCDDCHLAAKLIAKVTNRLIVVRDAN 124
           K + L++HSEKLA+AY L+KTP   PIRVIKNLRMCDDCH A KLI+KV NR+IVVRDAN
Sbjct: 315 KVDNLSYHSEKLAVAYGLMKTPSGAPIRVIKNLRMCDDCHTAIKLISKVANRVIVVRDAN 374

Query: 123 RFHTFKDGNCSCADYW 76
           RFH F++G CSC DYW
Sbjct: 375 RFHHFQNGYCSCGDYW 390


>ref|XP_003612499.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513834|gb|AES95457.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 172

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/83 (66%), Positives = 67/83 (80%)
 Frame = -3

Query: 303 KAEYLAFHSEKLAIAYALLKTPPNVPIRVIKNLRMCDDCHLAAKLIAKVTNRLIVVRDAN 124
           K  YL +HSEKLAI Y L+KTP   PIRVIKNLR+CDDCH A K I+KVTNR+I+VRDA+
Sbjct: 23  KESYLNYHSEKLAITYGLMKTPFLAPIRVIKNLRICDDCHTAVKPISKVTNRMIIVRDAS 82

Query: 123 RFHTFKDGNCSCADYW*HFYDMQ 55
           RFH F DG C+CAD+W HF+ ++
Sbjct: 83  RFHYFCDGTCTCADHWYHFHKLK 105


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