BLASTX nr result

ID: Cephaelis21_contig00049763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049763
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ...   110   1e-22
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar...   110   1e-22
emb|CBI16436.3| unnamed protein product [Vitis vinifera]              109   3e-22

>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = -3

Query: 516 HSEKLAVAFGLINPVGSTLIRITKNLRICGDCHEFIKHVSKLVGREIIVRDGIRFHHLKD 337
           HSEKLA+AFGL+N   +T +RI KNLR+C DCH  IK +SKLVGREIIVRD  RFHH KD
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773

Query: 336 GVCSCKDYW 310
           G CSC+DYW
Sbjct: 774 GSCSCRDYW 782


>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/69 (71%), Positives = 56/69 (81%)
 Frame = -3

Query: 516 HSEKLAVAFGLINPVGSTLIRITKNLRICGDCHEFIKHVSKLVGREIIVRDGIRFHHLKD 337
           HSEKLA+AFGL+N   +T +RI KNLR+C DCH  IK +SKLVGREIIVRD  RFHH KD
Sbjct: 714 HSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKD 773

Query: 336 GVCSCKDYW 310
           G CSC+DYW
Sbjct: 774 GSCSCRDYW 782


>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324425|gb|EFH54845.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 786

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/69 (71%), Positives = 55/69 (79%)
 Frame = -3

Query: 516 HSEKLAVAFGLINPVGSTLIRITKNLRICGDCHEFIKHVSKLVGREIIVRDGIRFHHLKD 337
           HSEKLA+AFGLI+    T +RI KNLR+C DCH  IK +SKLVGREIIVRD  RFHH KD
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777

Query: 336 GVCSCKDYW 310
           G CSC+DYW
Sbjct: 778 GFCSCRDYW 786


>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 786

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/69 (71%), Positives = 55/69 (79%)
 Frame = -3

Query: 516 HSEKLAVAFGLINPVGSTLIRITKNLRICGDCHEFIKHVSKLVGREIIVRDGIRFHHLKD 337
           HSEKLA+AFGLI+    T +RI KNLR+C DCH  IK +SKLVGREIIVRD  RFHH KD
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777

Query: 336 GVCSCKDYW 310
           G CSC+DYW
Sbjct: 778 GFCSCRDYW 786


>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/69 (71%), Positives = 54/69 (78%)
 Frame = -3

Query: 516 HSEKLAVAFGLINPVGSTLIRITKNLRICGDCHEFIKHVSKLVGREIIVRDGIRFHHLKD 337
           HSEKLA+AFGLIN    T IRI KNLR+C DCHE  K +SK+  REIIVRD IR+HH KD
Sbjct: 477 HSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKD 536

Query: 336 GVCSCKDYW 310
           G CSCKDYW
Sbjct: 537 GFCSCKDYW 545


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