BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049519
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    75   4e-12
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                72   4e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   6e-11
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    72   6e-11
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    70   2e-10

>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = -2

Query: 236 LWTKFWNIKLPEKISFFLWKAINNICPTADNIGKRGILIPRMCASCEAADESISHVLMDC 57
           LW   W + LP ++  F+WK   NI PT  N+ +RG+++  +C  C  ADES +H  M C
Sbjct: 259 LWKLIWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHRFMAC 318

Query: 56  PQAKLVWRLSPLGF 15
           P    VW  SPLGF
Sbjct: 319 PMTLQVWFASPLGF 332


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/103 (33%), Positives = 54/103 (52%)
 Frame = -2

Query: 335 VKSRYFLAQDETAKLLPSSSKGSRKPSHRREFPLWTKFWNIKLPEKISFFLWKAINNICP 156
           V+S Y+L+  + +  +P+ +K            L TK WN+ +  K+  FLW+ ++   P
Sbjct: 636 VRSGYWLSTHDPSNTIPTMAKP------HGSVDLKTKIWNLPIMPKLKHFLWRILSKALP 689

Query: 155 TADNIGKRGILIPRMCASCEAADESISHVLMDCPQAKLVWRLS 27
           T D +  RG+ I   C  C   +ESI+H L  CP A + WRLS
Sbjct: 690 TTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFATMAWRLS 732


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = -2

Query: 335  VKSRYFLAQDETAKLLPSSSKGSRKPSHRREFPLWTKFWNIKLPEKISFFLWKAINNICP 156
            V+S Y+    E  K  PS+S+G           LW K W  K+P K+  F WKAI+N   
Sbjct: 1024 VRSAYYHELLEDRKTGPSTSRGPN-------LKLWQKIWKAKIPPKVKLFSWKAIHNGLA 1076

Query: 155  TADNIGKRGILIPRMCASCEAADESISHVLMDCPQAKLVWRLSPL 21
               N+ KRG+ I   C  C   +E+  H++  C ++   W +SPL
Sbjct: 1077 VYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPL 1121


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1094

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/105 (34%), Positives = 54/105 (51%)
 Frame = -2

Query: 335  VKSRYFLAQDETAKLLPSSSKGSRKPSHRREFPLWTKFWNIKLPEKISFFLWKAINNICP 156
            VKS Y L   +  K +    +   +PS     PL+ K WN+    KI  FLWK +     
Sbjct: 743  VKSEYDLCSRQVHKQM--FKEAEEQPSLN---PLFGKIWNLNSAPKIKVFLWKVLKGAVA 797

Query: 155  TADNIGKRGILIPRMCASCEAADESISHVLMDCPQAKLVWRLSPL 21
              D +  RG+LI   C+ C   +E+++H+L  CP A+ VW L+P+
Sbjct: 798  VEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVWALTPM 842


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -2

Query: 221  WNIKLPEKISFFLWKAINNICPTADNIGKRGILIPRMCASCEAADESISHVLMDCPQAKL 42
            W ++ P K+  FLW+ ++   P ++N+ KRGIL  + C SC A++ESI+H L  C  A+ 
Sbjct: 829  WKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQ 888

Query: 41   VWRLSPL 21
            +W LS +
Sbjct: 889  IWALSQI 895