BLASTX nr result

ID: Cephaelis21_contig00049512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049512
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japo...    60   2e-07
gb|ABA99740.2| retrotransposon protein, putative, unclassified [...    60   2e-07
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               60   2e-07
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    60   2e-07
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              57   1e-06

>gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = -2

Query: 215 WKLSTNGKFNTAKAYKEISKHSWDQPSQEAGLIWKVTCPQRIKTFLWLAWKQKLMTNDNR 36
           W+ S NG F+ + AY+ +   S   P  E  LIWK   P R++ FLWLA K + +T DN 
Sbjct: 470 WRFSANGVFSASSAYEFLFSTSIKCPHGE--LIWKTKAPARVRFFLWLAVKGRCLTADNL 527

Query: 35  TKRGLTADASC 3
           +KRG   D +C
Sbjct: 528 SKRGWPHDPTC 538


>gb|ABA99740.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1618

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = -2

Query: 215 WKLSTNGKFNTAKAYKEISKHSWDQPSQEAGLIWKVTCPQRIKTFLWLAWKQKLMTNDNR 36
           W+ S NG F+ + AY+ +   S   P  E  LIWK   P R++ FLWLA K + +T DN 
Sbjct: 525 WRFSANGVFSASSAYEFLFSTSIKCPHGE--LIWKTKAPARVRFFLWLAVKGRCLTADNL 582

Query: 35  TKRGLTADASC 3
           +KRG   D +C
Sbjct: 583 SKRGWPHDPTC 593


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -2

Query: 215 WKLSTNGKFNTAKAYKEISKHSWDQPSQEA--GLIWKVTCPQRIKTFLWLAWKQKLMTND 42
           WK S +G+F+   AY+ ++     +P+  +    +WKV  P+R+KTFLWL   Q +MT +
Sbjct: 366 WKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEE 425

Query: 41  NRTKRGLTADASC 3
            R +R L+A   C
Sbjct: 426 ERHRRHLSASNVC 438


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -2

Query: 215 WKLSTNGKFNTAKAYKEISKHSWDQPSQEA--GLIWKVTCPQRIKTFLWLAWKQKLMTND 42
           WK S +G+F+   AY+ ++     +P+  +    +WKV  P+R+KTFLWL   Q +MT +
Sbjct: 257 WKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEE 316

Query: 41  NRTKRGLTADASC 3
            R +R L+A   C
Sbjct: 317 ERHRRHLSASNVC 329


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/71 (40%), Positives = 37/71 (52%)
 Frame = -2

Query: 215  WKLSTNGKFNTAKAYKEISKHSWDQPSQEAGLIWKVTCPQRIKTFLWLAWKQKLMTNDNR 36
            W  ST G    + AY  I+ H  D  S +   IW+ TC ++IK F+W   K  LM N  R
Sbjct: 1010 WPHSTTGMVTVSSAYSLIAGHDGDDRSHD--WIWRATCTEKIKLFMWKIVKNGLMVNVER 1067

Query: 35   TKRGLTADASC 3
             +RGL   ASC
Sbjct: 1068 KRRGLADAASC 1078


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