BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049105
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]             111   5e-23
emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]             108   4e-22
emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]             107   1e-21
emb|CAD22561.1| reverse transcriptase [Brassica rapa subsp. rapa]      99   4e-19
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    98   6e-19

>emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/127 (43%), Positives = 81/127 (63%)
 Frame = +3

Query: 3   LYNFVNKVFTRILCDCLAPILSQLISDEHTTFSPGQDISDSILLAQEMVQQLNRHTRSHN 182
           L N + K+  R+  D LA IL  +IS+    F  G++I ++I LAQE+ Q+ NR    HN
Sbjct: 8   LCNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHN 67

Query: 183 LILKLDMMKTFDRVSWPFLQSLFLRFGFHLHFVSLLMTNLSSA*FSIILNGVSSRFFKSS 362
           +I+KLDM K +DR+ W FL  + LRFGFH  +V+ +    ++  FS++ NG    FFKS+
Sbjct: 68  VIIKLDMGKAYDRLEWDFLFQVLLRFGFHPGWVNYIRAMFTNCWFSVLYNGGVHGFFKST 127

Query: 363 RGMKQGD 383
           RG++QGD
Sbjct: 128 RGLRQGD 134


>emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score =  108 bits (270), Expect = 4e-22
 Identities = 54/127 (42%), Positives = 80/127 (62%)
 Frame = +3

Query: 3   LYNFVNKVFTRILCDCLAPILSQLISDEHTTFSPGQDISDSILLAQEMVQQLNRHTRSHN 182
           L N + K+  R+  D LA IL  +IS+    F  G++I ++I LAQE+ Q+ NR    HN
Sbjct: 8   LCNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHN 67

Query: 183 LILKLDMMKTFDRVSWPFLQSLFLRFGFHLHFVSLLMTNLSSA*FSIILNGVSSRFFKSS 362
           +I+KLDM K +D + W FL  + LRFGFH  +V+ +    ++  FS++ NG    FFKS+
Sbjct: 68  VIIKLDMGKAYDWLEWDFLFQVLLRFGFHPGWVNYIRAMFTNCWFSVLYNGGVHGFFKST 127

Query: 363 RGMKQGD 383
           RG++QGD
Sbjct: 128 RGLRQGD 134


>emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/127 (41%), Positives = 80/127 (62%)
 Frame = +3

Query: 3   LYNFVNKVFTRILCDCLAPILSQLISDEHTTFSPGQDISDSILLAQEMVQQLNRHTRSHN 182
           L N + K+  R+  D LA IL  +IS+    F  G++I ++I LAQE+ Q+ NR    HN
Sbjct: 8   LCNLIYKIIARLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHN 67

Query: 183 LILKLDMMKTFDRVSWPFLQSLFLRFGFHLHFVSLLMTNLSSA*FSIILNGVSSRFFKSS 362
           +I+K DM + +DR+ W FL  + LRFGFH  +V+ +    ++  FS++ NG    FFKS+
Sbjct: 68  VIIKPDMGEAYDRLEWDFLFQVLLRFGFHPGWVNYIRAMFTNCWFSVLYNGGVHGFFKST 127

Query: 363 RGMKQGD 383
           RG++QGD
Sbjct: 128 RGLRQGD 134


>emb|CAD22561.1| reverse transcriptase [Brassica rapa subsp. rapa]
          Length = 139

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   LYNFVNKVFTRILCDCLAPILSQLISDEHTTFSPGQDISDSILLAQEMVQQL--NRHTRS 176
           L + V K+ ++ILCD L  +L  ++S     F  G+ ISD++L+A EMV  L  N   +S
Sbjct: 8   LCSVVYKIVSKILCDRLKIVLPHIVSPAQGAFVAGRLISDNVLVAHEMVHGLRTNPLCKS 67

Query: 177 HNLILKLDMMKTFDRVSWPFLQSLFLRFGFHLHFVSLLMTNLSSA*FSIILNGVSSRFFK 356
             + +K DM K +DRV W FL++LF + GFH  ++S +M  + S  FS++LNG S   F+
Sbjct: 68  EFIAIKTDMSKAYDRVEWDFLEALFQKLGFHQQWISWIMCCVRSVSFSVLLNGQSYGHFR 127

Query: 357 SSRGMKQGD 383
             +G+ QGD
Sbjct: 128 PKKGISQGD 136


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/150 (35%), Positives = 80/150 (53%)
 Frame = +3

Query: 9   NFVNKVFTRILCDCLAPILSQLISDEHTTFSPGQDISDSILLAQEMVQQLNRHTRSHNLI 188
           NF  K+ ++IL D LA I+  ++S E   F  G++I D + LA E +  L++ +   NL 
Sbjct: 199 NFKFKIISKILADRLAQIMPNIVSQEQRGFIQGRNIKDCVCLASEAINMLDQKSFGGNLA 258

Query: 189 LKLDMMKTFDRVSWPFLQSLFLRFGFHLHFVSLLMTNLSSA*FSIILNGVSSRFFKSSRG 368
            K+D+ K FD ++W FL  +  +FGF   F + +   L SA  SI +NG    +F  SRG
Sbjct: 259 FKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICINGSQQGYFSCSRG 318

Query: 369 MKQGDSXXXXXXXXXXXXXSRDLKRLVHEG 458
           ++QGD              SR L +LV +G
Sbjct: 319 VRQGDPLSPLLFCLAEDVLSRSLTKLVEQG 348