BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049008
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]     85   5e-15
gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [...    78   9e-13
gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [...    78   9e-13
ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin...    74   2e-11
ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
          Length = 479

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/75 (56%), Positives = 50/75 (66%)
 Frame = -3

Query: 297 EMSDEARQQAAVAHSVLLPRSVISXXXXXXXXXXXXXXXXQAMPYFNIPPLP*HDRAYYP 118
           E+SDEARQQAA+ HS LLPR+V+S                 +MPYFNIPP+P  DR YYP
Sbjct: 309 EVSDEARQQAALTHSGLLPRAVVSQQQNQPLQPPGTQDQPPSMPYFNIPPMPQQDRPYYP 368

Query: 117 SMDPQIMGALVPFQE 73
           SMDPQ MGA++  QE
Sbjct: 369 SMDPQRMGAVIASQE 383


>gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 487

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 297 EMSDEARQQAAVAHSVLLPRSVISXXXXXXXXXXXXXXXXQA-MPYFNIPPLP*HDRAYY 121
           E+SDEARQQAAV HS LLPR+VIS                   MPYFNIPP+   +RAYY
Sbjct: 309 ELSDEARQQAAVTHSGLLPRAVISQQQNQLPPPPGTQEQPPQPMPYFNIPPMLQQERAYY 368

Query: 120 PSMDPQIMGALVPFQE 73
           PSMDPQ MGA+V  Q+
Sbjct: 369 PSMDPQRMGAIVSSQD 384


>gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 462

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -3

Query: 297 EMSDEARQQAAVAHSVLLPRSVISXXXXXXXXXXXXXXXXQA-MPYFNIPPLP*HDRAYY 121
           E+SDEARQQAAV HS LLPR+VIS                   MPYFNIPP+   +RAYY
Sbjct: 309 ELSDEARQQAAVTHSGLLPRAVISQQQNQLPPPPGTQEQPAQPMPYFNIPPMLQQERAYY 368

Query: 120 PSMDPQIMGALVPFQE 73
           PSMDPQ MGA+V  Q+
Sbjct: 369 PSMDPQRMGAIVSSQD 384


>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 474

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/76 (53%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = -3

Query: 297 EMSDEARQQAAVAHSVLLPRSVISXXXXXXXXXXXXXXXXQA-MPYFNIPPLP*HDRAYY 121
           E S+EARQQAA+AH  +LPR+VIS                   M YFNIPP P  +R +Y
Sbjct: 309 ESSEEARQQAALAHGGMLPRAVISQQQNQVIQPPGTQDQPPPPMHYFNIPPPPQQERTFY 368

Query: 120 PSMDPQIMGALVPFQE 73
           PSMDPQ MGALVP QE
Sbjct: 369 PSMDPQRMGALVPSQE 384


>ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/75 (54%), Positives = 48/75 (64%)
 Frame = -3

Query: 297 EMSDEARQQAAVAHSVLLPRSVISXXXXXXXXXXXXXXXXQAMPYFNIPPLP*HDRAYYP 118
           E SDEARQQAA+AHS +LPR+V+S                  M YFNIPP P  +RA+YP
Sbjct: 309 ESSDEARQQAAMAHSGMLPRAVVSQQHNHLNPPGTQDQHPP-MHYFNIPPPPQQERAFYP 367

Query: 117 SMDPQIMGALVPFQE 73
           SMDPQ MGALV  Q+
Sbjct: 368 SMDPQRMGALVGSQD 382