BLASTX nr result
ID: Cephaelis21_contig00048055
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00048055 (236 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR16104.1| unknown [Picea sitchensis] gi|224286933|gb|ACN411... 60 1e-15 ref|XP_001770630.1| predicted protein [Physcomitrella patens sub... 59 2e-15 gb|AFK42383.1| unknown [Medicago truncatula] 59 2e-15 ref|XP_001770725.1| predicted protein [Physcomitrella patens sub... 58 3e-15 ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis... 57 3e-14 >gb|ABR16104.1| unknown [Picea sitchensis] gi|224286933|gb|ACN41169.1| unknown [Picea sitchensis] Length = 153 Score = 59.7 bits (143), Expect(3) = 1e-15 Identities = 28/40 (70%), Positives = 31/40 (77%) Frame = +1 Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234 EG +QRL Y GKQ+ DD T +DYNIEGGSVLHLVLAL Sbjct: 110 EGIPPVQQRLIYAGKQMNDDKTARDYNIEGGSVLHLVLAL 149 Score = 38.9 bits (89), Expect(3) = 1e-15 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +3 Query: 3 LRLRGGTMIKVKTLTGKESRLTL 71 LRLRGGTMIKVKTLTGKE + + Sbjct: 71 LRLRGGTMIKVKTLTGKEIEIDI 93 Score = 28.9 bits (63), Expect(3) = 1e-15 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 98 KERVEEKEGIPP 133 KERVEEKEGIPP Sbjct: 103 KERVEEKEGIPP 114 >ref|XP_001770630.1| predicted protein [Physcomitrella patens subsp. patens] gi|81230136|dbj|BAE48267.1| putative polyubiquitin [Physcomitrella patens] gi|81230138|dbj|BAE48268.1| putative polyubiquitin [Physcomitrella patens] gi|162678151|gb|EDQ64613.1| predicted protein [Physcomitrella patens subsp. patens] Length = 153 Score = 59.3 bits (142), Expect(3) = 2e-15 Identities = 28/40 (70%), Positives = 31/40 (77%) Frame = +1 Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234 EG +QRL + GKQ+ DD T KDYNIEGGSVLHLVLAL Sbjct: 110 EGIPPVQQRLIFAGKQMNDDKTAKDYNIEGGSVLHLVLAL 149 Score = 38.9 bits (89), Expect(3) = 2e-15 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +3 Query: 3 LRLRGGTMIKVKTLTGKESRLTL 71 LRLRGGTMIKVKTLTGKE + + Sbjct: 71 LRLRGGTMIKVKTLTGKEIEIDI 93 Score = 28.9 bits (63), Expect(3) = 2e-15 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 98 KERVEEKEGIPP 133 KERVEEKEGIPP Sbjct: 103 KERVEEKEGIPP 114 >gb|AFK42383.1| unknown [Medicago truncatula] Length = 153 Score = 58.9 bits (141), Expect(3) = 2e-15 Identities = 28/40 (70%), Positives = 31/40 (77%) Frame = +1 Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234 EG +QR+ Y GKQL DD T K+YNIEGGSVLHLVLAL Sbjct: 110 EGIPPVQQRVIYAGKQLADDKTAKEYNIEGGSVLHLVLAL 149 Score = 38.9 bits (89), Expect(3) = 2e-15 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +3 Query: 3 LRLRGGTMIKVKTLTGKESRLTL 71 LRLRGGTMIKVKTLTGKE + + Sbjct: 71 LRLRGGTMIKVKTLTGKEIEIDI 93 Score = 28.9 bits (63), Expect(3) = 2e-15 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 98 KERVEEKEGIPP 133 KERVEEKEGIPP Sbjct: 103 KERVEEKEGIPP 114 >ref|XP_001770725.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677943|gb|EDQ64407.1| predicted protein [Physcomitrella patens subsp. patens] Length = 153 Score = 58.2 bits (139), Expect(3) = 3e-15 Identities = 27/40 (67%), Positives = 31/40 (77%) Frame = +1 Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234 EG +QRL + GKQ+ DD T +DYNIEGGSVLHLVLAL Sbjct: 110 EGIPPVQQRLIFAGKQMNDDKTARDYNIEGGSVLHLVLAL 149 Score = 38.9 bits (89), Expect(3) = 3e-15 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = +3 Query: 3 LRLRGGTMIKVKTLTGKESRLTL 71 LRLRGGTMIKVKTLTGKE + + Sbjct: 71 LRLRGGTMIKVKTLTGKEIEIDI 93 Score = 28.9 bits (63), Expect(3) = 3e-15 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 98 KERVEEKEGIPP 133 KERVEEKEGIPP Sbjct: 103 KERVEEKEGIPP 114 >ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis] gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis] Length = 229 Score = 57.0 bits (136), Expect(3) = 3e-14 Identities = 27/40 (67%), Positives = 30/40 (75%) Frame = +1 Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234 EG +QRL + GKQ+ DD KDYNIEGGSVLHLVLAL Sbjct: 186 EGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHLVLAL 225 Score = 36.6 bits (83), Expect(3) = 3e-14 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = +3 Query: 3 LRLRGGTMIKVKTLTGKESRLTL 71 LRLRGG MIKVKTLTGKE + + Sbjct: 147 LRLRGGMMIKVKTLTGKEIEIDI 169 Score = 28.9 bits (63), Expect(3) = 3e-14 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +2 Query: 98 KERVEEKEGIPP 133 KERVEEKEGIPP Sbjct: 179 KERVEEKEGIPP 190 Score = 41.2 bits (95), Expect(3) = 2e-06 Identities = 22/40 (55%), Positives = 25/40 (62%) Frame = +1 Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234 EG +QRL + GKQL D T DYNI+ S LHLVL L Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 149 Score = 29.3 bits (64), Expect(3) = 2e-06 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = +3 Query: 3 LRLRGGTMIKVKTLTGK 53 LRLRGG I VKTLTGK Sbjct: 71 LRLRGGMQIFVKTLTGK 87 Score = 25.4 bits (54), Expect(3) = 2e-06 Identities = 8/14 (57%), Positives = 13/14 (92%) Frame = +2 Query: 98 KERVEEKEGIPPDK 139 K ++++KEGIPPD+ Sbjct: 103 KAKIQDKEGIPPDQ 116