BLASTX nr result

ID: Cephaelis21_contig00048055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048055
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16104.1| unknown [Picea sitchensis] gi|224286933|gb|ACN411...    60   1e-15
ref|XP_001770630.1| predicted protein [Physcomitrella patens sub...    59   2e-15
gb|AFK42383.1| unknown [Medicago truncatula]                           59   2e-15
ref|XP_001770725.1| predicted protein [Physcomitrella patens sub...    58   3e-15
ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis...    57   3e-14

>gb|ABR16104.1| unknown [Picea sitchensis] gi|224286933|gb|ACN41169.1| unknown
           [Picea sitchensis]
          Length = 153

 Score = 59.7 bits (143), Expect(3) = 1e-15
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +1

Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234
           EG    +QRL Y GKQ+ DD T +DYNIEGGSVLHLVLAL
Sbjct: 110 EGIPPVQQRLIYAGKQMNDDKTARDYNIEGGSVLHLVLAL 149



 Score = 38.9 bits (89), Expect(3) = 1e-15
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +3

Query: 3   LRLRGGTMIKVKTLTGKESRLTL 71
           LRLRGGTMIKVKTLTGKE  + +
Sbjct: 71  LRLRGGTMIKVKTLTGKEIEIDI 93



 Score = 28.9 bits (63), Expect(3) = 1e-15
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 98  KERVEEKEGIPP 133
           KERVEEKEGIPP
Sbjct: 103 KERVEEKEGIPP 114


>ref|XP_001770630.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|81230136|dbj|BAE48267.1| putative polyubiquitin
           [Physcomitrella patens] gi|81230138|dbj|BAE48268.1|
           putative polyubiquitin [Physcomitrella patens]
           gi|162678151|gb|EDQ64613.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 59.3 bits (142), Expect(3) = 2e-15
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +1

Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234
           EG    +QRL + GKQ+ DD T KDYNIEGGSVLHLVLAL
Sbjct: 110 EGIPPVQQRLIFAGKQMNDDKTAKDYNIEGGSVLHLVLAL 149



 Score = 38.9 bits (89), Expect(3) = 2e-15
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +3

Query: 3   LRLRGGTMIKVKTLTGKESRLTL 71
           LRLRGGTMIKVKTLTGKE  + +
Sbjct: 71  LRLRGGTMIKVKTLTGKEIEIDI 93



 Score = 28.9 bits (63), Expect(3) = 2e-15
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 98  KERVEEKEGIPP 133
           KERVEEKEGIPP
Sbjct: 103 KERVEEKEGIPP 114


>gb|AFK42383.1| unknown [Medicago truncatula]
          Length = 153

 Score = 58.9 bits (141), Expect(3) = 2e-15
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = +1

Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234
           EG    +QR+ Y GKQL DD T K+YNIEGGSVLHLVLAL
Sbjct: 110 EGIPPVQQRVIYAGKQLADDKTAKEYNIEGGSVLHLVLAL 149



 Score = 38.9 bits (89), Expect(3) = 2e-15
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +3

Query: 3   LRLRGGTMIKVKTLTGKESRLTL 71
           LRLRGGTMIKVKTLTGKE  + +
Sbjct: 71  LRLRGGTMIKVKTLTGKEIEIDI 93



 Score = 28.9 bits (63), Expect(3) = 2e-15
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 98  KERVEEKEGIPP 133
           KERVEEKEGIPP
Sbjct: 103 KERVEEKEGIPP 114


>ref|XP_001770725.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162677943|gb|EDQ64407.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 58.2 bits (139), Expect(3) = 3e-15
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +1

Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234
           EG    +QRL + GKQ+ DD T +DYNIEGGSVLHLVLAL
Sbjct: 110 EGIPPVQQRLIFAGKQMNDDKTARDYNIEGGSVLHLVLAL 149



 Score = 38.9 bits (89), Expect(3) = 3e-15
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +3

Query: 3   LRLRGGTMIKVKTLTGKESRLTL 71
           LRLRGGTMIKVKTLTGKE  + +
Sbjct: 71  LRLRGGTMIKVKTLTGKEIEIDI 93



 Score = 28.9 bits (63), Expect(3) = 3e-15
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 98  KERVEEKEGIPP 133
           KERVEEKEGIPP
Sbjct: 103 KERVEEKEGIPP 114


>ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
           gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox
           carteri f. nagariensis]
          Length = 229

 Score = 57.0 bits (136), Expect(3) = 3e-14
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = +1

Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234
           EG    +QRL + GKQ+ DD   KDYNIEGGSVLHLVLAL
Sbjct: 186 EGIPPVQQRLIFAGKQMNDDKQAKDYNIEGGSVLHLVLAL 225



 Score = 36.6 bits (83), Expect(3) = 3e-14
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +3

Query: 3   LRLRGGTMIKVKTLTGKESRLTL 71
           LRLRGG MIKVKTLTGKE  + +
Sbjct: 147 LRLRGGMMIKVKTLTGKEIEIDI 169



 Score = 28.9 bits (63), Expect(3) = 3e-14
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 98  KERVEEKEGIPP 133
           KERVEEKEGIPP
Sbjct: 179 KERVEEKEGIPP 190



 Score = 41.2 bits (95), Expect(3) = 2e-06
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = +1

Query: 115 EGRNSTRQRLTYGGKQLGDDSTGKDYNIEGGSVLHLVLAL 234
           EG    +QRL + GKQL D  T  DYNI+  S LHLVL L
Sbjct: 110 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 149



 Score = 29.3 bits (64), Expect(3) = 2e-06
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +3

Query: 3   LRLRGGTMIKVKTLTGK 53
           LRLRGG  I VKTLTGK
Sbjct: 71  LRLRGGMQIFVKTLTGK 87



 Score = 25.4 bits (54), Expect(3) = 2e-06
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +2

Query: 98  KERVEEKEGIPPDK 139
           K ++++KEGIPPD+
Sbjct: 103 KAKIQDKEGIPPDQ 116


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