BLASTX nr result
ID: Cephaelis21_contig00047943
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00047943 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96162.1| unknown [Populus trichocarpa] 161 4e-38 emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera] 152 3e-35 emb|CBI14973.3| unnamed protein product [Vitis vinifera] 150 8e-35 ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat... 150 8e-35 ref|XP_002887903.1| pentatricopeptide repeat-containing protein ... 145 4e-33 >gb|ABK96162.1| unknown [Populus trichocarpa] Length = 553 Score = 161 bits (408), Expect = 4e-38 Identities = 76/118 (64%), Positives = 93/118 (78%) Frame = +3 Query: 60 MLIPLRSLLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQL 239 MLI +SL +LSK+HQ+L++T+ LHA +TKTHL DPFYAT+LVRFYA NNDL SA+ L Sbjct: 1 MLIKFQSLFLQLSKTHQTLSRTKQLHALVTKTHLLQDPFYATKLVRFYALNNDLSSARNL 60 Query: 240 FDETPQRSVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKF 413 FD+TPQRSVFLWNSIIRAYA+ H F DAF L+ +M D PD +T+AC+ RAC E F Sbjct: 61 FDKTPQRSVFLWNSIIRAYAQAHKFDDAFLLYTKMIGFDVIPDKYTYACLIRACCEDF 118 >emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera] Length = 560 Score = 152 bits (384), Expect = 3e-35 Identities = 73/112 (65%), Positives = 88/112 (78%) Frame = +3 Query: 81 LLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDETPQR 260 LL ELSK HQSL +T+ LHAFI + HLS+DPFYATR++RFYA N+DL SA+ LFD T R Sbjct: 14 LLFELSKIHQSLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSHR 73 Query: 261 SVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416 SV+LWNS+IRAYA H F DA LF +M ++ KPDSFTFAC+ RAC+E FD Sbjct: 74 SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFD 125 >emb|CBI14973.3| unnamed protein product [Vitis vinifera] Length = 504 Score = 150 bits (380), Expect = 8e-35 Identities = 72/112 (64%), Positives = 88/112 (78%) Frame = +3 Query: 81 LLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDETPQR 260 LL ELSK HQ+L +T+ LHAFI + HLS+DPFYATR++RFYA N+DL SA+ LFD T R Sbjct: 14 LLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYR 73 Query: 261 SVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416 SV+LWNS+IRAYA H F DA LF +M ++ KPDSFTFAC+ RAC+E FD Sbjct: 74 SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFD 125 >ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g64310-like [Vitis vinifera] Length = 560 Score = 150 bits (380), Expect = 8e-35 Identities = 72/112 (64%), Positives = 88/112 (78%) Frame = +3 Query: 81 LLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDETPQR 260 LL ELSK HQ+L +T+ LHAFI + HLS+DPFYATR++RFYA N+DL SA+ LFD T R Sbjct: 14 LLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYR 73 Query: 261 SVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416 SV+LWNS+IRAYA H F DA LF +M ++ KPDSFTFAC+ RAC+E FD Sbjct: 74 SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFD 125 >ref|XP_002887903.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297333744|gb|EFH64162.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 552 Score = 145 bits (365), Expect = 4e-33 Identities = 69/115 (60%), Positives = 91/115 (79%) Frame = +3 Query: 72 LRSLLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDET 251 LR ++ E S+ Q+ TQ LH+F+TK+ L+ DP++AT+LVRFYA N+DL SA++LFD Sbjct: 7 LRLIIYEFSRKFQTRLSTQKLHSFVTKSKLARDPYFATQLVRFYALNDDLVSARKLFDVF 66 Query: 252 PQRSVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416 P+RSVFLWNSIIRAYAK + FS + SLF +M SSDT+PD+FT+AC+AR SE FD Sbjct: 67 PERSVFLWNSIIRAYAKAYQFSTSLSLFSQMLSSDTRPDNFTYACLARGFSESFD 121