BLASTX nr result

ID: Cephaelis21_contig00047943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047943
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96162.1| unknown [Populus trichocarpa]                          161   4e-38
emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]   152   3e-35
emb|CBI14973.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat...   150   8e-35
ref|XP_002887903.1| pentatricopeptide repeat-containing protein ...   145   4e-33

>gb|ABK96162.1| unknown [Populus trichocarpa]
          Length = 553

 Score =  161 bits (408), Expect = 4e-38
 Identities = 76/118 (64%), Positives = 93/118 (78%)
 Frame = +3

Query: 60  MLIPLRSLLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQL 239
           MLI  +SL  +LSK+HQ+L++T+ LHA +TKTHL  DPFYAT+LVRFYA NNDL SA+ L
Sbjct: 1   MLIKFQSLFLQLSKTHQTLSRTKQLHALVTKTHLLQDPFYATKLVRFYALNNDLSSARNL 60

Query: 240 FDETPQRSVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKF 413
           FD+TPQRSVFLWNSIIRAYA+ H F DAF L+ +M   D  PD +T+AC+ RAC E F
Sbjct: 61  FDKTPQRSVFLWNSIIRAYAQAHKFDDAFLLYTKMIGFDVIPDKYTYACLIRACCEDF 118


>emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
          Length = 560

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/112 (65%), Positives = 88/112 (78%)
 Frame = +3

Query: 81  LLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDETPQR 260
           LL ELSK HQSL +T+ LHAFI + HLS+DPFYATR++RFYA N+DL SA+ LFD T  R
Sbjct: 14  LLFELSKIHQSLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSHR 73

Query: 261 SVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416
           SV+LWNS+IRAYA  H F DA  LF +M  ++ KPDSFTFAC+ RAC+E FD
Sbjct: 74  SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFD 125


>emb|CBI14973.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/112 (64%), Positives = 88/112 (78%)
 Frame = +3

Query: 81  LLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDETPQR 260
           LL ELSK HQ+L +T+ LHAFI + HLS+DPFYATR++RFYA N+DL SA+ LFD T  R
Sbjct: 14  LLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYR 73

Query: 261 SVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416
           SV+LWNS+IRAYA  H F DA  LF +M  ++ KPDSFTFAC+ RAC+E FD
Sbjct: 74  SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFD 125


>ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310-like [Vitis vinifera]
          Length = 560

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/112 (64%), Positives = 88/112 (78%)
 Frame = +3

Query: 81  LLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDETPQR 260
           LL ELSK HQ+L +T+ LHAFI + HLS+DPFYATR++RFYA N+DL SA+ LFD T  R
Sbjct: 14  LLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYR 73

Query: 261 SVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416
           SV+LWNS+IRAYA  H F DA  LF +M  ++ KPDSFTFAC+ RAC+E FD
Sbjct: 74  SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFD 125


>ref|XP_002887903.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333744|gb|EFH64162.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 552

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/115 (60%), Positives = 91/115 (79%)
 Frame = +3

Query: 72  LRSLLSELSKSHQSLAKTQILHAFITKTHLSNDPFYATRLVRFYATNNDLDSAQQLFDET 251
           LR ++ E S+  Q+   TQ LH+F+TK+ L+ DP++AT+LVRFYA N+DL SA++LFD  
Sbjct: 7   LRLIIYEFSRKFQTRLSTQKLHSFVTKSKLARDPYFATQLVRFYALNDDLVSARKLFDVF 66

Query: 252 PQRSVFLWNSIIRAYAKIHLFSDAFSLFKRMWSSDTKPDSFTFACIARACSEKFD 416
           P+RSVFLWNSIIRAYAK + FS + SLF +M SSDT+PD+FT+AC+AR  SE FD
Sbjct: 67  PERSVFLWNSIIRAYAKAYQFSTSLSLFSQMLSSDTRPDNFTYACLARGFSESFD 121


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