BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047925
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517091.1| pentatricopeptide repeat-containing protein,...   157   1e-36
ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_002331487.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago t...   148   4e-34
gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]        114   8e-24

>ref|XP_002517091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543726|gb|EEF45254.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/155 (50%), Positives = 108/155 (69%)
 Frame = +2

Query: 2   FFNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYS 181
           FF +M++E + MD +S+VF+LK          G S+HC IWK+G+   L+V+N L+HFYS
Sbjct: 245 FFWQMVRERVEMDTRSFVFALKASEQFLTALEGESIHCAIWKIGFPCALLVQNGLIHFYS 304

Query: 182 EKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMIA 361
             G L  A+ VF E+  +DVVSWTS+IDG+   +   +AL LF  M  S +EPNEVTMI+
Sbjct: 305 VHGCLVLARKVFDETPARDVVSWTSMIDGYSTHDYYTDALKLFDSMLLSDVEPNEVTMIS 364

Query: 362 VCSACSLKGDLALARSVHEFVSKKCVKLSLNLMNS 466
           V SACS KGDL+L +S+HE+V +K + LS+NLMN+
Sbjct: 365 VLSACSQKGDLSLGKSIHEYVRRKNLNLSVNLMNA 399



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = +2

Query: 5   FNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHC-RIWKVGYVDDLIVRNALVHFYS 181
           F+ M+ E +     + V  L  CG L ++++G  +H   I +      +I+ NAL+  Y+
Sbjct: 479 FHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIHMYHIERKQKGTSVIIANALIDMYA 538

Query: 182 EKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVT 352
           + G + +A  VF     +D+VSW S+I        A +AL +FG+M     +P+++T
Sbjct: 539 KCGVIDAAARVFNGMPGRDLVSWNSMIAACASHGHAKQALLMFGQMIHEGFKPDDIT 595



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 31/170 (18%)
 Frame = +2

Query: 5   FNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYSE 184
           F+ M+  D+  +  + +  L  C     + +G S+H  + +      + + NA++  Y +
Sbjct: 347 FDSMLLSDVEPNEVTMISVLSACSQKGDLSLGKSIHEYVRRKNLNLSVNLMNAILDMYVK 406

Query: 185 KGQLSSAKGVFLESGVKDVVSWTS-------------------------------LIDGF 271
            G L +A+ +F   G KDV SWTS                               +I G+
Sbjct: 407 CGCLVAAREIFDSMGTKDVFSWTSMVNGYAKTGELEIARKFFDDMPKRNVVSWNAMIAGY 466

Query: 272 VRKNMADEALDLFGKMCSSSIEPNEVTMIAVCSACSLKGDLALARSVHEF 421
            + N   +A+ LF  M    + P E T++ V SAC   G L L R +H +
Sbjct: 467 SQNNQPKKAIVLFHHMVGEGLIPIENTLVCVLSACGQLGYLDLGRLIHMY 516


>ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/155 (47%), Positives = 106/155 (68%)
 Frame = +2

Query: 2   FFNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYS 181
           FF +MI+     D+ S+VF+LK CG  +   +G++VH  IWK G+  DL V+N L+  Y 
Sbjct: 139 FFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYV 198

Query: 182 EKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMIA 361
           E G L  A+ +F ES VKDVV+WT++I+G+ R N  DEA+ LF  M SS ++PNEVTMIA
Sbjct: 199 ETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIA 258

Query: 362 VCSACSLKGDLALARSVHEFVSKKCVKLSLNLMNS 466
           + SACS KGD  + +++HE + +K +  SLNL+N+
Sbjct: 259 LLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNA 293



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +2

Query: 62  LKGCGILSWIEMGLSVHCR-IWKVGYVDDLIVRNALVHFYSEKGQLSSAKGVFLESGVKD 238
           L   G L  +EMG  +HC  + K+G    LI++NA++  Y++ G + +A  +F     K+
Sbjct: 393 LSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKN 452

Query: 239 VVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMIAVCSACSLKG 388
           +VSW S+I  +     A +AL LF +M  S ++P+ +T I V SACS  G
Sbjct: 453 LVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGG 502



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 33/187 (17%)
 Frame = +2

Query: 5   FNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVH---------CRIWKVGYVDDLIVR 157
           FN M+  D+  +  + +  L  C      EMG ++H         C +  +  + D+ V+
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVK 300

Query: 158 ----------------------NALVHFYSEKGQLSSAKGVFLESGVKDVVSWTSLIDGF 271
                                  +L++ Y++ G L SA+ +F E   +++VSW ++I G+
Sbjct: 301 CGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGY 360

Query: 272 VRKNMADEALDLFGKMCS-SSIEPNEVTMIAVCSACSLKGDLALARSVH-EFVSKKCVKL 445
            + +   EAL+LF  M     + P E T++ V SA    G L + + +H   V+K  +++
Sbjct: 361 SQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQV 420

Query: 446 SLNLMNS 466
           SL L N+
Sbjct: 421 SLILKNA 427


>ref|XP_002331487.1| predicted protein [Populus trichocarpa] gi|222873565|gb|EEF10696.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  149 bits (375), Expect = 3e-34
 Identities = 78/156 (50%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   FFNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYS 181
           FF +M+++ + MD +S+VF+LK C     +  G SVHC +WK+G+V  L+V+N LVHFY 
Sbjct: 137 FFCQMVQKGVEMDCRSFVFALKACEQFLGVLEGKSVHCVVWKMGFVYTLLVQNGLVHFYG 196

Query: 182 EKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCS-SSIEPNEVTMI 358
            +G L  A+ VF E   +DVVSWTS+IDG+ +    DEAL LF  M     +EPNEVTMI
Sbjct: 197 LRGCLGLARLVFDEISERDVVSWTSMIDGYSKHKWCDEALKLFDSMLMYGVVEPNEVTMI 256

Query: 359 AVCSACSLKGDLALARSVHEFVSKKCVKLSLNLMNS 466
           AV S+CS KGDL L ++  E+V  + V  SLNLMN+
Sbjct: 257 AVLSSCSQKGDLILGKTFLEYVKTRNVTRSLNLMNA 292



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/122 (29%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
 Frame = +2

Query: 71  CGILSWIEMGLSVHCRIWKVGYVD-DLIVRNALVHFYSEKGQLSSAKGVFLESGVKDVVS 247
           CG L  +++G  +H    ++ Y +  +I+ NAL+  Y++ G +  A  VF +   +++VS
Sbjct: 331 CGQLGCLDVGQWIHRNYVRMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVS 390

Query: 248 WTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMIAVCSACSLKGDLALARSVHEFVS 427
           W S+I  +     A +AL +F +M S   +P+++T++ V SACS  G +A  +   + + 
Sbjct: 391 WNSMITAYASHGHAKQALSVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMK 450

Query: 428 KK 433
           +K
Sbjct: 451 RK 452


>ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355500337|gb|AES81540.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1024

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/155 (46%), Positives = 110/155 (70%)
 Frame = +2

Query: 2   FFNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYS 181
           FF  M +  + MD++S+VF+LK C     +  G SV+C +WK+G+  +L+VRN L+HFY+
Sbjct: 244 FFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYA 303

Query: 182 EKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMIA 361
           E+G L +A+ VF ES  KDVV+WT++IDG+   + ++EA+++F  M  S +EPNEVT+IA
Sbjct: 304 ERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIA 363

Query: 362 VCSACSLKGDLALARSVHEFVSKKCVKLSLNLMNS 466
           V SACS  G+L + + VHE V +K ++ SL+L N+
Sbjct: 364 VVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNA 398



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/145 (26%), Positives = 79/145 (54%), Gaps = 2/145 (1%)
 Frame = +2

Query: 5   FNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIV--RNALVHFY 178
           F+ M++  +     + V  L  CG L+ + +G  +H + + VG +  L V   NA+V  Y
Sbjct: 478 FHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIH-QYFVVGKIIPLSVTLENAIVDMY 536

Query: 179 SEKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMI 358
           ++ G + +A  VF     ++++SW ++I G+     A +A+++F +M +   EPN +T +
Sbjct: 537 AKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFV 596

Query: 359 AVCSACSLKGDLALARSVHEFVSKK 433
           ++ +ACS  G ++  R   + + +K
Sbjct: 597 SLLTACSHGGLISEGREYFDNMERK 621



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 32/186 (17%)
 Frame = +2

Query: 5   FNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYSE 184
           F  M+   +  +  + +  +  C  +  +EMG  VH ++ +      L + NAL+  Y +
Sbjct: 346 FELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVK 405

Query: 185 KGQLSSAKGVFLESGVKDVVSWTSLIDGFVR----------------------------- 277
              L  A+ +F     KDV SWTS+++G+ +                             
Sbjct: 406 CDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGY 465

Query: 278 --KNMADEALDLFGKMCSSSIEPNEVTMIAVCSACSLKGDLALARSVHE-FVSKKCVKLS 448
              N   E+L LF +M    + P E T+++V SAC     L L   +H+ FV  K + LS
Sbjct: 466 SQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLS 525

Query: 449 LNLMNS 466
           + L N+
Sbjct: 526 VTLENA 531


>gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
          Length = 648

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
 Frame = +2

Query: 38  DNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYSEKGQLSSAKGVF 217
           D+ ++ F +K C  L +   G +V   + K+G+  D+ V NA +HF+S +G ++ A+ +F
Sbjct: 120 DHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLF 179

Query: 218 LESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMC--SSSIEPNEVTMIAVCSACSLKGD 391
            ES V+DVVSW +LI G+VR  +  EAL+LF ++    +++ P+EVT+I   S C+  GD
Sbjct: 180 DESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGD 239

Query: 392 LALARSVHEFVSKKCVKLSLNLMNS 466
           L L + +HEFV  K V+ ++ LMN+
Sbjct: 240 LELGKRLHEFVDNKGVRCTVRLMNA 264



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/143 (30%), Positives = 71/143 (49%)
 Frame = +2

Query: 5   FNRMIKEDIGMDNKSYVFSLKGCGILSWIEMGLSVHCRIWKVGYVDDLIVRNALVHFYSE 184
           F+ M K  +  +  + V  L  C  L  +EMG+ VH  I +      + +  +LV  Y++
Sbjct: 344 FHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAK 403

Query: 185 KGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALDLFGKMCSSSIEPNEVTMIAV 364
            G +  A  VF E  V++ ++WTS+I G      ADEA++ F +M    ++P+E+T I V
Sbjct: 404 CGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGV 463

Query: 365 CSACSLKGDLALARSVHEFVSKK 433
            SAC   G +   R     +  K
Sbjct: 464 LSACCHAGLVEAGRQFFSLMHAK 486



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 31/174 (17%)
 Frame = +2

Query: 38  DNKSYVFSLKGCGILSWIEMGLSVH---------CRIWKVGYVDDLIVR----------- 157
           D  + + ++ GC  +  +E+G  +H         C +  +  V D+ V+           
Sbjct: 223 DEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVF 282

Query: 158 -----------NALVHFYSEKGQLSSAKGVFLESGVKDVVSWTSLIDGFVRKNMADEALD 304
                        ++  ++  G +  A+ +F E   +DV  W +L+ G+V+     EA+ 
Sbjct: 283 ERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIA 342

Query: 305 LFGKMCSSSIEPNEVTMIAVCSACSLKGDLALARSVHEFVSKKCVKLSLNLMNS 466
           LF +M  S ++PNE+TM+ + SACS  G L +   VH ++ +  + LS+ L  S
Sbjct: 343 LFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTS 396