BLASTX nr result

ID: Cephaelis21_contig00047888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047888
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   264   9e-69
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   264   9e-69
emb|CBI15151.3| unnamed protein product [Vitis vinifera]              264   1e-68
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   264   1e-68
ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor...   261   8e-68

>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  264 bits (675), Expect = 9e-69
 Identities = 127/155 (81%), Positives = 139/155 (89%)
 Frame = +3

Query: 3    NVGDHIALLNVYNSWKETGFSTQWCYANFIQVRSMKRARDIRDQLVALLERVEIGLTSNP 182
            NVGDH+ALL VYNSWKET +STQWCY N+IQVRSMKRARDIRDQL  LLERVEI LTSN 
Sbjct: 871  NVGDHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTSNA 930

Query: 183  NDLEAIKKAITSGFFPNSASLQKNGPYRTIKLQQNVYLHPSSGLFGVPPRWVIYHELVLT 362
            NDL+AIKK+ITSGFFP+SA LQKNG YRT+K  Q V++HPSSGL  V PRWV+YHELVLT
Sbjct: 931  NDLDAIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLT 990

Query: 363  SKEFMRQVTELKPEWLVEIAPHYYQLKDVEDSGSK 467
            +KE+MRQVTELKPEWLVEIAPHYYQLKDVEDS SK
Sbjct: 991  TKEYMRQVTELKPEWLVEIAPHYYQLKDVEDSYSK 1025


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  264 bits (675), Expect = 9e-69
 Identities = 127/155 (81%), Positives = 139/155 (89%)
 Frame = +3

Query: 3    NVGDHIALLNVYNSWKETGFSTQWCYANFIQVRSMKRARDIRDQLVALLERVEIGLTSNP 182
            NVGDH+ALL VYNSWKET +STQWCY N+IQVRSMKRARDIRDQL  LLERVEI LTSN 
Sbjct: 880  NVGDHMALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTSNA 939

Query: 183  NDLEAIKKAITSGFFPNSASLQKNGPYRTIKLQQNVYLHPSSGLFGVPPRWVIYHELVLT 362
            NDL+AIKK+ITSGFFP+SA LQKNG YRT+K  Q V++HPSSGL  V PRWV+YHELVLT
Sbjct: 940  NDLDAIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPSSGLAQVLPRWVVYHELVLT 999

Query: 363  SKEFMRQVTELKPEWLVEIAPHYYQLKDVEDSGSK 467
            +KE+MRQVTELKPEWLVEIAPHYYQLKDVEDS SK
Sbjct: 1000 TKEYMRQVTELKPEWLVEIAPHYYQLKDVEDSYSK 1034


>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  264 bits (674), Expect = 1e-68
 Identities = 127/161 (78%), Positives = 141/161 (87%)
 Frame = +3

Query: 3    NVGDHIALLNVYNSWKETGFSTQWCYANFIQVRSMKRARDIRDQLVALLERVEIGLTSNP 182
            NVGDHIALL VY+SWKET +STQWCY N+IQVRSMKRARD+RDQL  LLERVEI L SNP
Sbjct: 788  NVGDHIALLKVYSSWKETNYSTQWCYENYIQVRSMKRARDVRDQLEGLLERVEIELASNP 847

Query: 183  NDLEAIKKAITSGFFPNSASLQKNGPYRTIKLQQNVYLHPSSGLFGVPPRWVIYHELVLT 362
            NDL+AIKK+IT+GFFP+SA LQKNG YRT+K  Q V++HPSSGL  V PRWVIYHELVLT
Sbjct: 848  NDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLT 907

Query: 363  SKEFMRQVTELKPEWLVEIAPHYYQLKDVEDSGSKMPMRRE 485
            +KE+MRQVTELKPEWLVEIAPH+YQLKDVED GSK   R E
Sbjct: 908  TKEYMRQVTELKPEWLVEIAPHFYQLKDVEDPGSKKMPRTE 948


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  264 bits (674), Expect = 1e-68
 Identities = 127/161 (78%), Positives = 141/161 (87%)
 Frame = +3

Query: 3    NVGDHIALLNVYNSWKETGFSTQWCYANFIQVRSMKRARDIRDQLVALLERVEIGLTSNP 182
            NVGDHIALL VY+SWKET +STQWCY N+IQVRSMKRARD+RDQL  LLERVEI L SNP
Sbjct: 890  NVGDHIALLKVYSSWKETNYSTQWCYENYIQVRSMKRARDVRDQLEGLLERVEIELASNP 949

Query: 183  NDLEAIKKAITSGFFPNSASLQKNGPYRTIKLQQNVYLHPSSGLFGVPPRWVIYHELVLT 362
            NDL+AIKK+IT+GFFP+SA LQKNG YRT+K  Q V++HPSSGL  V PRWVIYHELVLT
Sbjct: 950  NDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPSSGLAQVLPRWVIYHELVLT 1009

Query: 363  SKEFMRQVTELKPEWLVEIAPHYYQLKDVEDSGSKMPMRRE 485
            +KE+MRQVTELKPEWLVEIAPH+YQLKDVED GSK   R E
Sbjct: 1010 TKEYMRQVTELKPEWLVEIAPHFYQLKDVEDPGSKKMPRTE 1050


>ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Brachypodium distachyon]
          Length = 1051

 Score =  261 bits (667), Expect = 8e-68
 Identities = 127/155 (81%), Positives = 139/155 (89%)
 Frame = +3

Query: 3    NVGDHIALLNVYNSWKETGFSTQWCYANFIQVRSMKRARDIRDQLVALLERVEIGLTSNP 182
            NVGDHIALLNVYNSWKET FSTQWCY N+IQVRSMKRARDIRDQL  LLERVEI + SN 
Sbjct: 886  NVGDHIALLNVYNSWKETDFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIEVCSNA 945

Query: 183  NDLEAIKKAITSGFFPNSASLQKNGPYRTIKLQQNVYLHPSSGLFGVPPRWVIYHELVLT 362
            +DL+AIKKAITSGFF +SA LQKNG YRT+K  Q V++HPSSGL  + PRWVIYHELVLT
Sbjct: 946  SDLDAIKKAITSGFFHHSARLQKNGSYRTVKNPQTVFVHPSSGLAQLLPRWVIYHELVLT 1005

Query: 363  SKEFMRQVTELKPEWLVEIAPHYYQLKDVEDSGSK 467
            +KE+MRQVTELKPEWLVEIAPHYYQLKDV+DSGSK
Sbjct: 1006 TKEYMRQVTELKPEWLVEIAPHYYQLKDVDDSGSK 1040


Top