BLASTX nr result

ID: Cephaelis21_contig00047848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047848
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306555.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002302327.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
emb|CAB10239.1| hypothetical protein [Arabidopsis thaliana] gi|7...    59   3e-07
ref|XP_002890796.1| hypothetical protein ARALYDRAFT_336024 [Arab...    59   5e-07
ref|NP_567434.1| protein transport protein SFT1 [Arabidopsis tha...    57   1e-06

>ref|XP_002306555.1| predicted protein [Populus trichocarpa] gi|222856004|gb|EEE93551.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/43 (72%), Positives = 34/43 (79%)
 Frame = -2

Query: 197 KEREGLSTRQAGASDEIQLRIDPIHGELD*EITSFCKQVRQLR 69
           + REGLSTR   +SDEIQLRIDPIHG+LD EIT    QVRQLR
Sbjct: 20  RSREGLSTRPMASSDEIQLRIDPIHGDLDDEITGLRSQVRQLR 62


>ref|XP_002302327.1| predicted protein [Populus trichocarpa] gi|222844053|gb|EEE81600.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/43 (69%), Positives = 33/43 (76%)
 Frame = -2

Query: 197 KEREGLSTRQAGASDEIQLRIDPIHGELD*EITSFCKQVRQLR 69
           + REGLSTR   +SDEIQLRIDPIH +LD EIT    QVRQLR
Sbjct: 7   RSREGLSTRPVASSDEIQLRIDPIHWDLDDEITGLRSQVRQLR 49


>emb|CAB10239.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268166|emb|CAB78502.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 590

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = -2

Query: 197 KEREGLSTRQAGASDEIQLRIDPIHGELD*EITSFCKQVRQLRKCKLFFPIIF*YLCDYL 18
           + REGLSTR A  S+EIQLRIDP+H +LD EIT    QVRQL+      P  F     Y+
Sbjct: 22  RSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLKN-----PFGFESGSVYV 76

Query: 17  FFFQN 3
           F FQ+
Sbjct: 77  FLFQS 81


>ref|XP_002890796.1| hypothetical protein ARALYDRAFT_336024 [Arabidopsis lyrata subsp.
           lyrata] gi|297336638|gb|EFH67055.1| hypothetical protein
           ARALYDRAFT_336024 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = -2

Query: 191 REGLSTRQAGASDEIQLRIDPIHGELD*EITSFCKQVRQLRKCKLFFPIIF*YLCDYLF 15
           REGLSTR A  S+EIQLRIDP+H +LD EI     QVRQL+   L   +     C+ LF
Sbjct: 36  REGLSTRNASGSEEIQLRIDPMHSDLDDEIIGLHGQVRQLKNIALILSLSIIVECNNLF 94


>ref|NP_567434.1| protein transport protein SFT1 [Arabidopsis thaliana]
           gi|75248462|sp|Q8VXX9.1|BETL1_ARATH RecName:
           Full=Bet1-like protein At4g14600
           gi|18389246|gb|AAL67066.1| unknown protein [Arabidopsis
           thaliana] gi|20259643|gb|AAM14339.1| unknown protein
           [Arabidopsis thaliana] gi|21554084|gb|AAM63165.1|
           unknown [Arabidopsis thaliana]
           gi|26452326|dbj|BAC43249.1| unknown protein [Arabidopsis
           thaliana] gi|332658064|gb|AEE83464.1| protein transport
           protein SFT1 [Arabidopsis thaliana]
          Length = 137

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -2

Query: 197 KEREGLSTRQAGASDEIQLRIDPIHGELD*EITSFCKQVRQLR 69
           + REGLSTR A  S+EIQLRIDP+H +LD EIT    QVRQL+
Sbjct: 22  RSREGLSTRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLK 64


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