BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047735
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S...    97   1e-18
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    93   2e-17
emb|CAA12932.1| reverse transcriptase [Pinus elliottii]                93   3e-17
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    93   3e-17
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    93   3e-17

>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
           gi|241943773|gb|EES16918.1| hypothetical protein
           SORBIDRAFT_08g007680 [Sorghum bicolor]
          Length = 649

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/122 (39%), Positives = 75/122 (61%)
 Frame = -3

Query: 388 ADSSPWFDGYIGLFYRICWDIIAPDLLLMV*ELFSGVLLPRIISSTQIILLPKTQSPHSF 209
           A+++P  DG+   FY++ WD+I  ++   V    +G  LP  I+ T I+L+PKT++P   
Sbjct: 3   ANNAPGPDGFTARFYQLHWDLIGKEVTTAVLNFLNGGTLPADINHTTIVLIPKTRNPQGM 62

Query: 208 MNFHPISLCTLLKTIFTQIIYDRLCSLLPLLVSGEQSTFLKGRDIIDNILLSQELVQYLH 29
             F PISLC +L  I ++++  RL   L  ++S EQS F+ GR I DN+L+S E + YL 
Sbjct: 63  TEFRPISLCNVLYKICSKVLALRLREFLDEIISEEQSAFVPGRLITDNVLISYECIHYLK 122

Query: 28  KR 23
           +R
Sbjct: 123 RR 124


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/121 (38%), Positives = 73/121 (60%)
 Frame = -3

Query: 388 ADSSPWFDGYIGLFYRICWDIIAPDLLLMV*ELFSGVLLPRIISSTQIILLPKTQSPHSF 209
           +D SP  DGY   F++  W+II  +  L V   F+   LP+ I+ST + L+PK       
Sbjct: 467 SDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREM 526

Query: 208 MNFHPISLCTLLKTIFTQIIYDRLCSLLPLLVSGEQSTFLKGRDIIDNILLSQELVQYLH 29
            ++ PIS C +L  + ++II +RL  +LP  ++G QS F+K R +I+N+LL+ ELV+  H
Sbjct: 527 KDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYH 586

Query: 28  K 26
           K
Sbjct: 587 K 587


>emb|CAA12932.1| reverse transcriptase [Pinus elliottii]
          Length = 194

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/118 (38%), Positives = 76/118 (64%)
 Frame = -3

Query: 376 PWFDGYIGLFYRICWDIIAPDLLLMV*ELFSGVLLPRIISSTQIILLPKTQSPHSFMNFH 197
           P  DG    FY++CW+I+  D+  +V +      + + ++ST I L+PK +  H+   F 
Sbjct: 2   PGPDGITINFYKVCWEIVKNDIWEIVEDSRRSKTILKSLNSTFIALVPKVEEAHTPEKFR 61

Query: 196 PISLCTLLKTIFTQIIYDRLCSLLPLLVSGEQSTFLKGRDIIDNILLSQELVQYLHKR 23
           PI+LC ++  I +++I +RL  +LP ++S EQS +++GR I+DNILL+QE++  LH R
Sbjct: 62  PIALCNVIYKIISKVIANRLKIILPGIISQEQSGYVEGRQILDNILLAQEMIHSLHSR 119


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/120 (36%), Positives = 73/120 (60%)
 Frame = -3

Query: 385 DSSPWFDGYIGLFYRICWDIIAPDLLLMV*ELFSGVLLPRIISSTQIILLPKTQSPHSFM 206
           D SP  DGY   FY+  W+II  ++++ +   F+   LP+ ++ST + L+PK +      
Sbjct: 189 DKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIK 248

Query: 205 NFHPISLCTLLKTIFTQIIYDRLCSLLPLLVSGEQSTFLKGRDIIDNILLSQELVQYLHK 26
           ++ PIS C +L    ++I+ +RL  +LP  + G QS F+K R +I+N+LL+ ELV+  HK
Sbjct: 249 DYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHK 308


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/120 (38%), Positives = 73/120 (60%)
 Frame = -3

Query: 385 DSSPWFDGYIGLFYRICWDIIAPDLLLMV*ELFSGVLLPRIISSTQIILLPKTQSPHSFM 206
           D SP  DGY   FY+  W+II  + +L +   F+   LP+ I+ST + L+PK +      
Sbjct: 356 DKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMK 415

Query: 205 NFHPISLCTLLKTIFTQIIYDRLCSLLPLLVSGEQSTFLKGRDIIDNILLSQELVQYLHK 26
           ++ PIS C +L  + ++II +RL  +LP  + G QS F+K R +I+N+LL+ E+V+  HK
Sbjct: 416 DYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHK 475